Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1878 ATGCACTCTCGGAAATTCTCCGTCTCGCCGTCGTCCCCGCTTGTTCCCGATCCACACCCACCTGCTCTTTCTCCAAATCAGCCACACCCCTCTTACAAGAACCCCAAAAGCCACCATCTTTTGCCTCCGCTTGTAGCTTCCGCCGCCTCTGTATGTTCCTTCTTCCTTCTCTTTTTCCTCTGTTTTCGCAGACTCGCGAGGAAACGCACCACCCCTTCTTCTGATTCTGAGTCCAAGCCTCCTTTTCGTTTCTCGTATTCCGTCCTCCGCCGTGCCACGTCATCCTTCTCCACCCGCCTTGGCCAAGGCGGCTTCGGCCCCGTCTACTCCGGCACCCTGCCTCCAACCCGACAACCCGTGGCCGTCAAGCTCATGGACTCTACCTCTCTCCAGGGCGAGCGCGAGTTTCACAACGAACTCTTCTTCGCCTCCAGGCTTCACTCTCAGCGCGTGGTCTCCGCCATCGGCTTTTGCTCTGACAGAAATCGCCGGAGGTTTTTACTTGTGTATGAGTTGATGCATAATGGTAACCTCCAAGACGCGCTCTTGCACCGCAAGTGCCCTGAGCTGTTGGATTGGAAGAAGCGGTTTTCCGTCATCCTCGACATAGCCAAAGGGATTCAGTATCTTCACTCTTGCGACCCATCCGTGATTCACGGTGACATCAAACCCAGTAATATTCTATTAGACCGTTCTCTATCGGCAAAAATTGGGGATTTCGGGCTTGCACGGTTGAAATCGGAGCGCCAGATTGAAATTGGGATTTTGAACTTAGACGGTAATGAAAAGAAGAACGGTGGATTGGAGTTAGAAGAAGAGAAGAAGGGAAAAGAAGAAGAATTAGAGAGTAATGGTGGGTCATTGCTTGAAGAAACACAGAGCGTGGATACCGTTGACGAAGGTAGCTTAGCTACGGAGCAATCTCCAGAGGGTTTTGTCAGGATACCCATATCGGAGCCGTCCCCAGGGCCGGTGAAGGCGGCGATGGTAGCGTCACCTTCGGAGGCGAATTTCGACAAAGTTAGCTTTCAGAGTGAGAAAAACATTTCCTTGAGTTGTAAGAAAAATGGGAAAGTCATAAAGAGCAATTCCATGAAGGATTGGTGGTGGAAACAAGACATGGAAGAAGCAGCAGAATCCCGCATGGGTGAGAACAAGAAAGTGAAGGATTATGTAATGGAGTGGCTTGGAAAAGAAATAAACAAAGAAAGACCCAAGAGCGAATGGGTTGCAGCTACCTCTAGTAGTGGAGCAACCATGGAAAAAGGAGAGAAAAATAAGAGCAAGAGGCGCTTGGAATGGTGGAGATCAATGGACGAGGAAACCATTAATCCTAAAGCTGTGAAGAAGAAGGAGAAGAGAAGACCAGCAAGAGAATGGTGGAAAGAGGAGTACTGTGAAGAGCTTGCGAAGAAGAAGAAGAAGAAGAAGAAGAAACAGCAGCAAAAGGGAAATGGAATAAACAGTGACGATGATTATTGGTGGGTAAGAGACGCTGAAGACATGTATGGAGAAAGAAAAAAGGCCAAAACCCGTAAAAATAGTTATGGTAATATAGATTCATGGTTAAATGGATTCAGCGGTGAGTTATTCAGAGCTCGAAGAAACAGCCATGATTCTGCAGCAAGCTGGGAAATTCCCAAGAGTGGTGGTGTTAGTAGTACACCAAGCATGAGAGGAACAGTTTGTTATGTTGCTCCTGAATATGGTTTTGGTGAAGATTTATCAGAGAAGTGTGATGTATATAGTTTTGGGGTTCTATTACTTGTTATAGTTTCCGGGCGACGTCCACTTCAAGTGACCGGTTCGCCATTATCAGAGTTTCATAGAGCAAATCTACTGTCATGGGCACGCCATTGTGCACGCAATGGCAAGCTGCTCGATCTGGTCGATCAGTCTATTAAGTCATTAGACAAAGATGAAGCTCTTCTCTGCATCACAATTGCTCTTCTCTGCCTGCTCAAAACCCCTTCTCGTCGCCCTTCTATGAAAGAGGTTGTGGGAATGCTTAGTGGTGAACTTGAGCCACCACAGTTGCCAATTGAGTATTCACCTTCGACCCCATCTCGCATCCGAGCCAAGGCTCGCAAAAAGGGTCCCTGA 2103 0.4793 MHSRKFSVSPSSPLVPDPHPPALSPNQPHPSYKNPKSHHLLPPLVASAASVCSFFLLFFLCFRRLARKRTTPSSDSESKPPFRFSYSVLRRATSSFSTRLGQGGFGPVYSGTLPPTRQPVAVKLMDSTSLQGEREFHNELFFASRLHSQRVVSAIGFCSDRNRRRFLLVYELMHNGNLQDALLHRKCPELLDWKKRFSVILDIAKGIQYLHSCDPSVIHGDIKPSNILLDRSLSAKIGDFGLARLKSERQIEIGILNLDGNEKKNGGLELEEEKKGKEEELESNGGSLLEETQSVDTVDEGSLATEQSPEGFVRIPISEPSPGPVKAAMVASPSEANFDKVSFQSEKNISLSCKKNGKVIKSNSMKDWWWKQDMEEAAESRMGENKKVKDYVMEWLGKEINKERPKSEWVAATSSSGATMEKGEKNKSKRRLEWWRSMDEETINPKAVKKKEKRRPAREWWKEEYCEELAKKKKKKKKKQQQKGNGINSDDDYWWVRDAEDMYGERKKAKTRKNSYGNIDSWLNGFSGELFRARRNSHDSAASWEIPKSGGVSSTPSMRGTVCYVAPEYGFGEDLSEKCDVYSFGVLLLVIVSGRRPLQVTGSPLSEFHRANLLSWARHCARNGKLLDLVDQSIKSLDKDEALLCITIALLCLLKTPSRRPSMKEVVGMLSGELEPPQLPIEYSPSTPSRIRAKARKKGP 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1878 700 MobiDBLite consensus disorder prediction 1 35 - -
Lele06g1878 700 MobiDBLite consensus disorder prediction 407 429 - -
Lele06g1878 700 MobiDBLite consensus disorder prediction 264 308 - -
Lele06g1878 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Lele06g1878 700 Gene3D Phosphorylase Kinase; domain 1 82 172 - -
Lele06g1878 700 MobiDBLite consensus disorder prediction 13 28 - -
Lele06g1878 700 MobiDBLite consensus disorder prediction 675 700 - -
Lele06g1878 700 FunFam Os07g0541700 protein 173 255 - -
Lele06g1878 700 Pfam Protein tyrosine and serine/threonine kinase 96 248 IPR001245 GO:0004672|GO:0006468
Lele06g1878 700 Pfam Protein tyrosine and serine/threonine kinase 556 668 IPR001245 GO:0004672|GO:0006468
Lele06g1878 700 SUPERFAMILY Protein kinase-like (PK-like) 71 687 IPR011009 -
Lele06g1878 700 MobiDBLite consensus disorder prediction 286 304 - -
Lele06g1878 700 PANTHER OS07G0586332 PROTEIN 23 698 IPR044576 -
Lele06g1878 700 Coils Coil 462 482 - -
Lele06g1878 700 SMART serkin_6 94 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1878 700 MobiDBLite consensus disorder prediction 264 284 - -
Lele06g1878 700 Gene3D Transferase(Phosphotransferase) domain 1 173 265 - -
Lele06g1878 700 Gene3D Transferase(Phosphotransferase) domain 1 533 677 - -
Lele06g1878 700 ProSiteProfiles Protein kinase domain profile. 94 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1878 Lele-ChrLele06 13266892 13268994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1878 548 667 Receptor kinase-like Gene Family AT3G58690 36.000 1.17e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele06g1878 PK_Tyr_Ser-Thr 5.8e-29 CL0016