Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1870 ATGATGAAGCTTTGTAAGTTATTACTGAAGTTGCTCACAGTCCTCATAAAGCTCTACAAGTCATTGCTACAAGCTGCCTACCTTCTTCAAAGAGCTCTACAAATCACTATGGCTACTGTTCATCATCGTGGCAAGTCTTCTTTACTGAAAAAGATGAAAGAAGACACAGAGATGGGACAACAAGCTATACTACACAACGTTGAAAATTATTTTGAAGCAATGGAGGAGGCTCCAACGGTGTTGTTTCGTACCGGCGAGCAGGGGAAAAAGGTTAAGCTGTTTTTAGTTATGGCGCTGTTGTTGTCGTTCCTTTGTTCCTTTGCTTCAACTCTCAGCGACGAAGGACAAACATTAATGAGTATCAAGGCTTCTTTCAGTAATGCAGCAAATGAGTTGCTTGATTGGGATGGTGTACAAAATGACGACTTTTGTTCTTGGCGTGGAGTATACTGTGATAAGACCAGCATTACTGTGCTTACTCTGAATCTGTCAAGTTTAAACTTGGGCGGCGAAATATCACTGGCCGTCGGTGAATTAAGAAACTTGCAATCCATAGATCTCCAGGGGAATAAACTAAGTGGTCAAATTCCAGATGAAATTGGGAACTGTACCTTCCTTATCCATCTATGCAGAGATTTGTCTGATAACCAGCTCTATGGGGACGTGCCTTTCTCCCTATCAAAGCTAAAGAAGCTAGAGTTTCTAAATTTGAAGAATAATCTGTTGACTGGTCCGATTCCTTCAACACTAACCCAAATTCCTAACCTGAAAACGATTGATCTTGCTCGAAACCACCTCACTGGTGAGATACCAAGACTACTGTATTGGAACGAAGTCCTGCAGTATCTAGGTTTGCGAGGGAACAATCTGACTGGAACTCTGTCCCCTGACATTTGTCAGTTAACTGGTTTGTGGTATTTTGATGTGAGAGGCAATAATTTAACGGGTACAATACCTGAAAGCATTGGAAACTGTACAAGCTTTGAGATTTTGGACTTATCATATAATCAGATCAGCGGGGAAATTCCTTACAACATTGGATTCCTGCAAGTTGCAACTTTGTCTCTTCAAGGTAATAGCCTGACTGGCAAGATTCCAGAGGTGATTGGTTTGATGCAAGCTCTTGCTATTTTGGATTTGAGTGAGAATGAGCTGGTGGGATCTATCCCTCCAATCCTTGGCAATTTATCTTTTACCGGAAAGCTGTACCTCCATGGAAACTTGCTTTCTGGTCCTATTCCACCAGAACTTGGCAATATGTCTAGATTAAGTTACCTGCAATTGAATGACAACCAATTAGTTGGCAAAATTCCTGAAGAACTTGGAAGGCTTGGAAATTTGTTTGAATTAGATCTTGCCAACAATAATCTTGAGGGACCTATTCCACATAACATCAGCTCTTGCACAGCCCTGAATCAGTTCAATGTGCATGGTAATCGCTTGAGTGGATCCATTCCTCCGAGTTTTAGAACCCTTGAGAGTTTGACTTACCTAAATCTTTCTGCTAACAACTTCAAAGGGAGCATACCTGTTGAACTGGGCCACATCATAAATCTTGATATGCTGGATCTGTCAAGCAATAACTTTGCAGGTCCTGTTCCATCATCTATTGGTGACTTGGAGCATCTCTTGACCTTGAACCTAAGCCATAACCTTCTTGATGGTCCATTGCCTGCTGAATTTGGGATTTTGAGAAGCATACAGATCATCGATATTTCACACAACCGTCTTTCGGGTAATATCCCTGTGGAAATTGGTCAACTGCAGAACCTTGTGTCTCTGATACTGAACAACAATGGTTTGCAAGGGAGAATTCCAGATCAGCTAGCTAATTGCTTGAGTCTCTCCTCCTTAAATGTTTCGTGCAATAATTTATCTGGAACTATTCCTCTTATGAGGAATTTCTCAAGGTTTTCAGCTGACAGTTTCATTGGAAATCCGTTATTATGTGGGAAAAAGTTAGGATCATTTTGTGGTCCTTACTTACCAAAATCCAGAGTGATTTTCTCAACGGTTGCAGTCCTTTGTTTCGCATTGGGTTTCGTCACAATATTGGTAATGGTCATTATTGCTATTTATAGATCCAGCCAGTCAAAGCAATTCATGAAAGGGCCGAGCAGATTTGAACAAGGTCCCCCCAAACTTGTAATTCTTCATATGGATATGGCAATTCATACCTTGAACGATATAATGAGAGCTACTGAGAATCTCAGCGAGAAATATATCATAGGGTATGGTGCCTCTAGTACAGTGTACAAGTGTAATTTAGACGGTTCCCGGCCAATGGCAATTAAGCGACTTTACAACCAGCATCCACACAATTTGCAAGAGTTTGAAACAGAACTTGAGACTGTTGGCAGCATTAGACACAGAAACCTTGTCACCTTGCATGGTTATGCACTGACCCCCAATGGAAATCTCCTATTCTATGACTACATGGAGAATGGCTCTCTGTGGGATCTCCTTCATGGTTCCTTGAAGAAGGTAAAACTTGACTGGGAAACGCGATTAAGGATCGCTGTTGGTGCTGCTGAAGGACTTGCTTATCTTCATCATGATTGCAACCCTCGGATTATTCACAGGGATGTTAAATCCTCAAATATTTTGCTGGATGAGAACTTTGAGCCTCATCTTTCTGATTTCGGTATTGCAAAAAGCATATCAACAACAAGAACTCATGCTTCAACTTTTGTTCTTGGAACCATTGGTTATATCGATCCGGAGTATGCCCGGACTTCTCGGTTGAATGAAAAATCAGATGTTTACAGCTTTGGCATTGTTCTACTAGAGCTACTAACTAGGAAGAAAGCAGTAGATAATGAGTCTAACTTGCTACAATTGATATTGTCCAAGGCGGATAACAACACTGTAATGGAAGCTGTGGATCCAGATGTCTCAGTGACCTGCTTGGATCTGGCTCATGTGAAGAAAACTTTTCGGCTTGCTCTGCTATGCACCAAAAGAAACCCTTCTGAGAGGCCTACCATGCATGAGGTTGCAAGGGTATTGTTGTCATTACTTCCTACACCGCCGCCTAATAAGGTGTTTACTGCCCCGGCGAAGATGGCTGATTATGCTCAATTTTTGATAGACCAGGGACGATGA 3105 0.4161 MMKLCKLLLKLLTVLIKLYKSLLQAAYLLQRALQITMATVHHRGKSSLLKKMKEDTEMGQQAILHNVENYFEAMEEAPTVLFRTGEQGKKVKLFLVMALLLSFLCSFASTLSDEGQTLMSIKASFSNAANELLDWDGVQNDDFCSWRGVYCDKTSITVLTLNLSSLNLGGEISLAVGELRNLQSIDLQGNKLSGQIPDEIGNCTFLIHLCRDLSDNQLYGDVPFSLSKLKKLEFLNLKNNLLTGPIPSTLTQIPNLKTIDLARNHLTGEIPRLLYWNEVLQYLGLRGNNLTGTLSPDICQLTGLWYFDVRGNNLTGTIPESIGNCTSFEILDLSYNQISGEIPYNIGFLQVATLSLQGNSLTGKIPEVIGLMQALAILDLSENELVGSIPPILGNLSFTGKLYLHGNLLSGPIPPELGNMSRLSYLQLNDNQLVGKIPEELGRLGNLFELDLANNNLEGPIPHNISSCTALNQFNVHGNRLSGSIPPSFRTLESLTYLNLSANNFKGSIPVELGHIINLDMLDLSSNNFAGPVPSSIGDLEHLLTLNLSHNLLDGPLPAEFGILRSIQIIDISHNRLSGNIPVEIGQLQNLVSLILNNNGLQGRIPDQLANCLSLSSLNVSCNNLSGTIPLMRNFSRFSADSFIGNPLLCGKKLGSFCGPYLPKSRVIFSTVAVLCFALGFVTILVMVIIAIYRSSQSKQFMKGPSRFEQGPPKLVILHMDMAIHTLNDIMRATENLSEKYIIGYGASSTVYKCNLDGSRPMAIKRLYNQHPHNLQEFETELETVGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIIHRDVKSSNILLDENFEPHLSDFGIAKSISTTRTHASTFVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTRKKAVDNESNLLQLILSKADNNTVMEAVDPDVSVTCLDLAHVKKTFRLALLCTKRNPSERPTMHEVARVLLSLLPTPPPNKVFTAPAKMADYAQFLIDQGR 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1870 1034 Gene3D Ribonuclease Inhibitor 111 277 IPR032675 -
Lele06g1870 1034 Pfam Leucine rich repeat 518 577 IPR001611 GO:0005515
Lele06g1870 1034 Pfam Leucine rich repeat N-terminal domain 112 152 IPR013210 -
Lele06g1870 1034 SUPERFAMILY RNI-like 283 631 - -
Lele06g1870 1034 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 111 277 - -
Lele06g1870 1034 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 813 1014 - -
Lele06g1870 1034 Gene3D Phosphorylase Kinase; domain 1 707 812 - -
Lele06g1870 1034 SMART serkin_6 737 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1870 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 858 870 IPR008271 GO:0004672|GO:0006468
Lele06g1870 1034 Gene3D Transferase(Phosphotransferase) domain 1 813 1010 - -
Lele06g1870 1034 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 278 387 - -
Lele06g1870 1034 SMART LRR_typ_2 253 277 IPR003591 -
Lele06g1870 1034 SMART LRR_typ_2 492 516 IPR003591 -
Lele06g1870 1034 SMART LRR_typ_2 301 325 IPR003591 -
Lele06g1870 1034 SMART LRR_typ_2 588 612 IPR003591 -
Lele06g1870 1034 SMART LRR_typ_2 179 203 IPR003591 -
Lele06g1870 1034 SMART LRR_typ_2 372 396 IPR003591 -
Lele06g1870 1034 SMART LRR_typ_2 444 468 IPR003591 -
Lele06g1870 1034 SMART LRR_typ_2 229 252 IPR003591 -
Lele06g1870 1034 ProSitePatterns Protein kinases ATP-binding region signature. 743 765 IPR017441 GO:0005524
Lele06g1870 1034 Gene3D Ribonuclease Inhibitor 278 352 IPR032675 -
Lele06g1870 1034 Gene3D Ribonuclease Inhibitor 353 660 IPR032675 -
Lele06g1870 1034 Pfam Protein kinase domain 740 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1870 1034 SUPERFAMILY Protein kinase-like (PK-like) 717 1003 IPR011009 -
Lele06g1870 1034 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 708 812 - -
Lele06g1870 1034 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 388 661 - -
Lele06g1870 1034 ProSiteProfiles Protein kinase domain profile. 737 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1870 1034 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 252 1003 - -
Lele06g1870 1034 SUPERFAMILY L domain-like 142 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1870 Lele-ChrLele06 13184294 13192376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1870 349 645 Receptor kinase-like Gene Family AT5G07180 36.391 1.30e-43 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lele06g1870 Pkinase 2.8e-42 CL0016