Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1852 ATGGGTTCTTCTACAGGTCATCTCCTTCTTCTCTTCTCTCTCCTATTCTTTCTCTCTTACCCAACATGGGTCTTTGGAAATGCAGAGCTCAGAGCTCTCATGGACATGAAAGCTGCTCTTGACCCAGAAAGCCGTTATCTTTCTTCTTGGATTTCCAATGGGAATCCATGTCGTTTTGAAGGAGTGGCTTGTAACGAGAAGGGTCAAGTGGCTAACATTTCGTTGCAGGGGAAGGGTCTCTCTGGGAAGCTCTCGTCCGCCATTGATGGCCTCAAGCAATTAACAGGGCTTTACTTGCATTATAACTCTCTCTACGGTGAAATACCCAAAGAAATTGCCAACTTGCCTGAGCTCACTGATTTGTATTTGAACGTGAATAACTTCTCAGGAGAAATCCCAACTGAGATCGGCAGACTGGAGAACTTGCAAGTTTTGCAGCTTTGCTACAATCAATTGAAGGGAAGTATACCTACTCAGCTTGGTGGTTTGAAGAAGCTTAGTGTTCTTGCTCTGCAGTCAAATCAATTAACTGGAGCTATCCCTGCTAGTTTAGGCAACTTGGGAATGTTAATGAGGCTCGACTTGAGCTCTAATCGCCTGTTCGGTTCGATCCCCTCCAAATTAGCCGATGCCGCTTCTCTTAAAGTTCTTGATCTTCGCAACAATACTCTCTCTGGGAATGTACCATCTGCTCTGAAGAGGCTTGAAGATGGATTCTTGTATGAATACAATTTGGGATTATGTGGAGCTGGGTTTTCATCCTTGAAGACTTGCAGTGCAACTGATCATGTTGATCCAAGTAGGCTTGATCCGTATGGAGCTGGTATTAATGGTCAACCAACGAGTGACCTTCCAGAAACTGCGAATGTTAAGTTGCCCTGCAATGGAGATCGGTGTGAAAAGTCATCATCGAAATCTAAACAGACAACATCTGTAACTGTTGGCGTAGTTGTGATTGCCATAGCAGTGTCAGCGGTTGGCATTCTAACGTTTGTGCATTATCGCCGGAGAAAGCAGAAGCTTGGGAACTCATACGATGTCTCTGATAGCCGTCTAAGTACTGATCAAGCTAAGGCTGTCGTATACAGGAAAAATGGCTCTCCTCTAATCAGCCTTGAGTACTCCAATGGATGGGACCCTTTGGCTGATAGCAGGAACTTCAACGGGGATAGCCAAGACATGTTCCAAAGTTTCAGGTTCAACTTGGAAGAGGTCGAAAGTGCGACTCAGTATTTCTCGGACTCGAATCTGTTAGGTAAGAGTAACTTCAGTGCAACTTATAAAGGAGTGTTGAGAGATGGGTCTGTAGTTGCTGTGAAGAGCATCAGCAAAACTAGTTGCAAGTCAGATGAAGCTGAGTTCTTGAAGGGGTTGAACATTTTGACATCACTGAGGAATGAGAATCTAGTTAGGCTCAGAGGCTTTTGTTGTTCTAGGGGACGAGGCGAGTGCTTTCTCGTTTATGATTTTGTTCCTAATGGAAATCTTTCACGCTACCTCGATGTACAGGAAGGCGATGGGCAAGTCCTTGAATGGTCAGCCAGAGTTTCCATTGTCAAAGGGATTGCTAAAGGTATTGCATACTTACATGCACACAAAGCGAACAAACCTGCGCTTGTTCACCAGAACATCTCGGCTGAGAAAGTGCTCATTGATCAGCGATTCAATCCATTGCTTTTGGATTCTGGCCTCTTCAGGATCCTCACTAACGACATCGTCTTCTCGGGGCTCAAGGCTAGTGCGGCAAAGGGCTATCTAGCACCGGAGTACACGACCACAGGCCGGTTCACTGAGAAAAGTGACGTGTATGCTTTTGGAGTGCTTCTTTTCCAGATCCTCTCTGGGAAGCAGAAGATCACTAGCACAATGCGCCTCTTAGCAGAATCGTCGAGGTTCCTAGAGGTTGTGGACCCGAAACTGAATGGCAAGTTCTTCGAATTTGAGGCGGCTAAGTTGTTGAAGATGGCTCGGGTTTGTTCACACGAGTCTTCTTTTGAGAGGCCGTCCATGGAAACCATTGTTCAAGAACTGAACCATTGTAGTAGCTGTCTGTGA 2055 0.4564 MGSSTGHLLLLFSLLFFLSYPTWVFGNAELRALMDMKAALDPESRYLSSWISNGNPCRFEGVACNEKGQVANISLQGKGLSGKLSSAIDGLKQLTGLYLHYNSLYGEIPKEIANLPELTDLYLNVNNFSGEIPTEIGRLENLQVLQLCYNQLKGSIPTQLGGLKKLSVLALQSNQLTGAIPASLGNLGMLMRLDLSSNRLFGSIPSKLADAASLKVLDLRNNTLSGNVPSALKRLEDGFLYEYNLGLCGAGFSSLKTCSATDHVDPSRLDPYGAGINGQPTSDLPETANVKLPCNGDRCEKSSSKSKQTTSVTVGVVVIAIAVSAVGILTFVHYRRRKQKLGNSYDVSDSRLSTDQAKAVVYRKNGSPLISLEYSNGWDPLADSRNFNGDSQDMFQSFRFNLEEVESATQYFSDSNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLVYDFVPNGNLSRYLDVQEGDGQVLEWSARVSIVKGIAKGIAYLHAHKANKPALVHQNISAEKVLIDQRFNPLLLDSGLFRILTNDIVFSGLKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILSGKQKITSTMRLLAESSRFLEVVDPKLNGKFFEFEAAKLLKMARVCSHESSFERPSMETIVQELNHCSSCL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1852 684 Gene3D Transferase(Phosphotransferase) domain 1 491 683 - -
Lele06g1852 684 Gene3D Ribonuclease Inhibitor 175 239 IPR032675 -
Lele06g1852 684 FunFam Protein NSP-INTERACTING KINASE 2 491 681 - -
Lele06g1852 684 FunFam Protein NSP-INTERACTING KINASE 2 383 490 - -
Lele06g1852 684 Pfam Protein tyrosine and serine/threonine kinase 416 677 IPR001245 GO:0004672|GO:0006468
Lele06g1852 684 SUPERFAMILY Protein kinase-like (PK-like) 388 678 IPR011009 -
Lele06g1852 684 ProSiteProfiles Protein kinase domain profile. 412 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1852 684 SUPERFAMILY L domain-like 38 234 - -
Lele06g1852 684 Gene3D Phosphorylase Kinase; domain 1 382 490 - -
Lele06g1852 684 CDD STKc_IRAK 418 678 - -
Lele06g1852 684 FunFam Leucine-rich repeat receptor-like kinase 28 135 - -
Lele06g1852 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 72 679 - -
Lele06g1852 684 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Lele06g1852 684 Gene3D Ribonuclease Inhibitor 26 174 IPR032675 -
Lele06g1852 684 FunFam Protein NSP-INTERACTING KINASE 2 137 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1852 Lele-ChrLele06 13013264 13016759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1852 8 525 Miscellaneous Gene Families AT4G22730 55.955 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lele06g1852 PK_Tyr_Ser-Thr 3.8e-36 CL0016