Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1825 ATGATGGACCTTAGATTAGTGACTCCTTTTTCTAATTTAATGTTGGCCATACAAGCATTATCGTTTCATATTAAGTCAAAATATTCAAATACCCTAGCCTCCTTCACCGCTTCCCCCTGCGACTCCTTTTCCTTCCACCGGTTTCACCTCTCCGACGACTTCTACTTGGCCGCCGCCGTTGCCTGCTCTCCCGTGCTCACTCCTCGACGTTGCTTTTGGAAACCTGAAATTACAGAAACGAAGGTTGGAGGTGATCTTACATGCATGGAGGTTGGAATTGGTAGAGATGGGGAAAAGTTTATAGATGCATTAAGATTGGAATTGGTGATAAAAGGAACTTCAGCTCATTGTCTTCAAGTGTTTTACTTGGGTCACAAGCTTTCTATCCTCTCAAACATGGCTACCAGACTTATGTTTGAGAACTCTTGTGAAGTTGGAGTGTTCTCTAAACTTACCAATGCCTATTGTTTGGTTGCCATCGGAGGTTCTGAAAGCTTCTACAGTGTATTTGAGTCTGAACTAGCAGGTGTTATCCCTGTGGTGAAGACCTCCATTGCTGGCACCCGTATTGTTGGCCGCCTTTGCGCTGGTAACAAGAATGGGCTTCTCTTGCCTCACAATACTACAGATCAAGAACTTCAACATTTGAGAAACAGCCTACCAGATCAAGTTGTTGTTCAGCGCGTAGAAGAAAGATTATCTGCTCTTGGAAATTGTATAGCGTGTAATGACCATGTGGCACTCGCGCACACTGATCTTGACAGGGAAACTGAAGAGCTGATTTCAGACGTACTAGGAGTAGAAGTTTTCAGACAGACCATTGCCGGAAATATTCTTGTCGGAAGTTACTGCGCCTTCTCCAACAGAGGTGGTTTGGTTCATCCTCACACTTCGATTGAAGACTTGGATGAGCTCTCAACACTTCTTCAGGTTCCTTTGGTTGCTGGGACTGTGAATCGTGGTAGTGAGGTCATAGCTGCTGGCATGACTGTTAATGACTGGACTGCATTTTGTGGATCAGACACAACAGCAACAGAACTCTCTGTGGTTGAGAGTGTTTTTAAGCTCAGGGAAGCTCAACCTAGTGCTATTGTGGACGAGATGAGGAAATCACTTATTGATAGCTACGTTTAA 1134 0.4444 MMDLRLVTPFSNLMLAIQALSFHIKSKYSNTLASFTASPCDSFSFHRFHLSDDFYLAAAVACSPVLTPRRCFWKPEITETKVGGDLTCMEVGIGRDGEKFIDALRLELVIKGTSAHCLQVFYLGHKLSILSNMATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSVFESELAGVIPVVKTSIAGTRIVGRLCAGNKNGLLLPHNTTDQELQHLRNSLPDQVVVQRVEERLSALGNCIACNDHVALAHTDLDRETEELISDVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVVESVFKLREAQPSAIVDEMRKSLIDSYV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1825 377 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 133 376 IPR002769 GO:0042256|GO:0043022
Lele06g1825 377 Gene3D - 133 357 - -
Lele06g1825 377 Hamap Translation initiation factor 6 [eif6]. 122 377 IPR002769 GO:0042256|GO:0043022
Lele06g1825 377 SMART eIF6neu2 135 336 IPR002769 GO:0042256|GO:0043022
Lele06g1825 377 Pfam eIF-6 family 136 335 IPR002769 GO:0042256|GO:0043022
Lele06g1825 377 SUPERFAMILY Pentein 133 356 - -
Lele06g1825 377 CDD IF6 134 355 IPR002769 GO:0042256|GO:0043022
Lele06g1825 377 TIGRFAM eIF-6: putative translation initiation factor eIF-6 136 356 IPR002769 GO:0042256|GO:0043022
Lele06g1825 377 FunFam Eukaryotic translation initiation factor 6 133 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1825 Lele-ChrLele06 12809103 12815620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1825 133 377 Eukaryotic Initiation Factors Gene Family AT3G55620 88.980 4.86e-167 465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1825 06 12809103 12815620 Lele07g2037 07 13622866 13627718 hybridization
Lele06g1825 06 12809103 12815620 Lele08g1828 08 12677415 12685270 hybridization