Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1822 ATGGCTTCTTTTAAGTTTTCATTCTGTGCTATTTTGTTCGTAACTTTCTCTTGCTCTCTTTTATTCCAAAGCCTTGCTAACAGCACCGGTACTTCTACTTTAGTCGTAGATTTTAGTTCTGGAAACCCAATCTCCAAATATTTTTTCGGAGTATTTTTTGAGGAAATTAATCATGCTGGTGCCGGGGGATTGTGGGCAGAGCTTGTCAATAATAGAGGTTTCGAAGCTGGAGCCACAGAGCTTGGGGTTCCCTCGAGCATCAATCCATGGACAATAATAGGAGATATATCAAATATTAATGTCGAAATTGAACCTACCTCCTTGTTTCCAACTAATCCAATGGCTCTCAAAATGGATATCCTCTGTCCTTCTCCAGCTATATGCCCTAATGGTGTTGGTCTCTCTAACCCTGGTTTTTGGGGCATGAATATTGAGCAAGGAAAGGAATATAGAGTTGTATTCTATCTTCGTGCCTTCAGACCAATTAATTTGAAAGTGGCTTTTACAGGAGCAGATGGCAAAGAATTGGCTTCTACTTACATCAAGGCTTCTGCAACTCATGTTGCAAAGTGGAAAAAGTTTGAGACTATTCTAAAAGCTAAAGCGTCGGATGTTGAAGCAAGCCTACAATTGACAACCAATCAAAAAGGAGTTATTTGGTTGGATCAAGTCTCAGCAATGCCTTTAGATACATATAAGGGACATGGCTTCAGAAAAGACCTTTTTCAAATGGTGGCTGATTTAAAGCCAACATTTCTTAGATTTCCTGGTGGTACTTATGTTGAAGGGGATTATTTGAGAAATGCATTTAGATGGAAGAAAACCATCGGACCATGGGAGAAGAGACCTGGTCATTTTAATGATATATGGGGTTATTGGGTTGATGATGGATTTGGTTATTTAGAATTTCTTCAATTATCCGAAGACCTTGGTACTGCTCCAGTATGGGTATTTAACAATGGTTTTAGTCATCATGATCATGTTAATACCAGTGAAGTTGATCCTATGGTTCAAGAAGCTCTTGATGGCATTGAATTTGCAAGAGGTCCGATCACATCAAGATGGGGTAGAGTAAGAGCCGCTTTAGGTCATCCCAAACCTTTTGATTTGCGATATGTTGCAATTGGAAACGAGGATTGTAGAATGGAAAATTACCAAGGAAACTATCTCAAATTTTATAACGCCATAAAGAGTGCATATCCAGATATGCAAACTATATCAAATTGCGATGCTACCGGAGGACCCTTGAAGCATCCGGCCGAGTTGTATGACTTCCATATATACACAAATGCTAAGGATATGTTCTCAAAGTATACCAAGTTTGATAATATGCCTCGTTCTGGTCCTAAGGCTTTTGTCAGTGAGTATGCTGTTTGGAATGATGATGCTAGAAATGGAACCCTCTTATCTGCGTTAGGTGAAGCTGCATTTCTTATGGGATTAGAGAAGAATAGTGAGGTTGTTGAAATGGTTAGCTATGCACCGCTCTTTGTGAATACAAACAACAAGAGTTCAACAGACAATAAAAGTTACGTAAGAGTGAAGGTTGTGAACTTCAACAACAATCCTACAACGCTTAAGATCACTTTCAATGGTTTAGACGCAAATGTGAAACTGTCTAAAGCAACAAAGACAGTGCTCACATCTTCCAATGTAATGGACGAAAATTCCTTCAAAGAGCCTACAAAGATTGCCCTGGTGCAAAGCCCATTAGAGAATGTTGGAAAAGATACAACTGTCACACTTCCTCCAAATTCAATCTCAGCTTTTGATTTTCCAAAGTGA 1785 0.391 MASFKFSFCAILFVTFSCSLLFQSLANSTGTSTLVVDFSSGNPISKYFFGVFFEEINHAGAGGLWAELVNNRGFEAGATELGVPSSINPWTIIGDISNINVEIEPTSLFPTNPMALKMDILCPSPAICPNGVGLSNPGFWGMNIEQGKEYRVVFYLRAFRPINLKVAFTGADGKELASTYIKASATHVAKWKKFETILKAKASDVEASLQLTTNQKGVIWLDQVSAMPLDTYKGHGFRKDLFQMVADLKPTFLRFPGGTYVEGDYLRNAFRWKKTIGPWEKRPGHFNDIWGYWVDDGFGYLEFLQLSEDLGTAPVWVFNNGFSHHDHVNTSEVDPMVQEALDGIEFARGPITSRWGRVRAALGHPKPFDLRYVAIGNEDCRMENYQGNYLKFYNAIKSAYPDMQTISNCDATGGPLKHPAELYDFHIYTNAKDMFSKYTKFDNMPRSGPKAFVSEYAVWNDDARNGTLLSALGEAAFLMGLEKNSEVVEMVSYAPLFVNTNNKSSTDNKSYVRVKVVNFNNNPTTLKITFNGLDANVKLSKATKTVLTSSNVMDENSFKEPTKIALVQSPLENVGKDTTVTLPPNSISAFDFPK 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1822 594 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lele06g1822 594 SMART alpha_l_af_c 454 586 IPR010720 GO:0046373|GO:0046556
Lele06g1822 594 Gene3D Glycosidases 214 518 - -
Lele06g1822 594 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 503 592 - -
Lele06g1822 594 SUPERFAMILY (Trans)glycosidases 209 504 IPR017853 -
Lele06g1822 594 FunFam Alpha-L-arabinofuranosidase 1 224 518 - -
Lele06g1822 594 Pfam Alpha-L-arabinofuranosidase C-terminal domain 455 504 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1822 Lele-ChrLele06 12786972 12790175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1822 1 594 Glycoside Hydrolase AT3G10740 52.888 0.0 696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1634 14 23930618 23937111 Lele06g1822 06 12786972 12790175 CCT
Lele15g0722 15 4171883 4179143 Lele06g1822 06 12786972 12790175 CCT
Lele16g0729 16 4111822 4119496 Lele06g1822 06 12786972 12790175 CCT
Lele05g1988 05 14150661 14154725 Lele06g1822 06 12786972 12790175 ECH
Lele06g1822 06 12786972 12790175 Lele06g1822 06 12786972 12790175 ECH
Lele06g1822 06 12786972 12790175 Lele07g2037 07 13622866 13627718 hybridization
Lele06g1822 06 12786972 12790175 Lele08g1827 08 12662664 12665889 hybridization