Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1816 ATGCATGTATCGGGAGGGCACGTGAACCCCGCCGTGACATTCGGAGCTCTTCTCGGAGGAAGGATATCGGTGCTGCGAGCTGTATACTACTGGGTGGCTCAACTCCTCGGAGCTATCGTGGCCGCTCTCTTGCTCAGGCTTGTCACCAGTAACATGAGACCAGCGTCGTTCTCATTGGCAATAGGGGAGGGTGCGATGCACGCGCTGATACTAGAGATAGTGATGACGTTCGGCCTGATGTACACCGTCTACGGCACTGCCATTGACCCAAAAAGAGGTACTAATGGAGCATTAGCCCCACTGGCAATTGGGCTCATAGTTGGGGCCAACATCCTCGTTGGTGGGCCTTTCGATGGGGCCTGCATGAACCCAGCTCGGGCTTTCGGGCCTTCCTTAGTAGGCTGGAGATGGCACTACCACTGGATCTACTGGGTCGGGCCACTCATCGGAGCCGGGCTTGCAGCTCTTGTCTATGAATACATTGTCATCCCCACCGAGCCTCCTCATCCTCACCAACCTCTCGCTCCTGAAGATTATTGA 540 0.5574 MHVSGGHVNPAVTFGALLGGRISVLRAVYYWVAQLLGAIVAALLLRLVTSNMRPASFSLAIGEGAMHALILEIVMTFGLMYTVYGTAIDPKRGTNGALAPLAIGLIVGANILVGGPFDGACMNPARAFGPSLVGWRWHYHWIYWVGPLIGAGLAALVYEYIVIPTEPPHPHQPLAPEDY 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1816 179 ProSitePatterns MIP family signature. 7 15 IPR022357 -
Lele06g1816 179 Gene3D Glycerol uptake facilitator protein. 1 168 IPR023271 -
Lele06g1816 179 SUPERFAMILY Aquaporin-like 2 170 IPR023271 -
Lele06g1816 179 CDD MIP 1 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1816 179 Pfam Major intrinsic protein 2 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1816 179 PANTHER AQUAPORIN-8 2 166 IPR034294 -
Lele06g1816 179 PRINTS Major intrinsic protein family signature 71 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1816 179 PRINTS Major intrinsic protein family signature 104 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1816 179 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g1816 179 PRINTS Major intrinsic protein family signature 141 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1816 Lele-ChrLele06 12694268 12695962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1816 1 179 Major Intrinsic Protein MIP AT1G73190 73.370 3.72e-95 275