Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1809 ATGGATCAGAAAATATCGGAAGAAGGTGGACAAAGCGGTTTGAATTTTAAGTGTGCGAAGATCCTTCATGGAGCTGATAAATCTGTAGCTATTCAGACTCCAGAGAAGACTAGTGAGCCTTTACCTACCAATTCCAAGGAGGGATCCCCCCAGCTTCCAAAAACATACAAGGCTTTAGCAGATTTATTTGACAATATGAGTTGTTCACTGAGGTTGCTTTGTCTGTGTAAAAAATCCACCACCTTTCAAAACATTTGTTCTCAGGTCGAAGTTCTCGCTAAAAGAAAATTCTTGTACACGGATCTTGCGCAGATAAAGTATTTACTTCCTGAAGCCATACATATAGAGAAGGTATTAGTACATGAAAGTAGAAACTTGTGTATGAAGCCTGATTTGAAGATCACCTTGGTACATGATGTTTTGCTGGGACACTCTGGTGAAAATACTTATATGGCTCTCCGGCAACTTTTTGGTTCTAGGCTACTCGAGTTCTTCAATACGCATCCAGACAATACTGATATTCCAGAAGCTACACTACCAGAACCTTTTCAACAAAGAACTCATAGCTTGATTTGTGAGGACTTGCCTGTAGATCCTTCAACAATACGCTCATCATCATCTTCAGATCAAAATCAACAGCTATTACAGGAATGTCAGCCATATCCTTTTAAAAGGCATTTCTCAAAGAAGAATGTTGTGGCAGAGACAGAAAATAATGTTGTGTCAAGTCAAATTGCTCAGTCACATCATTCATCTGATTGCTTGGATAATGAAGGAGGTGAAGGTGACAATGAATGGCAGAAAAAACGTCTTACTTCATATTTGAAATCTGATAGCACAAATGATCAGGATATGGAAAAAGGACAGCAGAATGAATCATGTTCTGTAGAATTCCATTGTAGTGTCAATACACCAGCACGCTTGATTTGCTCTCCACAGTCTGTTAGTTGTGGTAGTTATGAAAGCTCTTATATCAAGATTACCTCATCCACAGATATCTTAATGACAGAGACACCTGCTCAGTCAACACCTAGAAGAGTGGCGCCCAGTTCTGATGTTAAGCCTAAGATTTTGACCGCCCAAAATTCAATTTCAGGCAATAAGCATGTAAAAAGAGTTCTTTTTTCACATGAAGGTGATTATGACGCTGACAAGTTAGAATCAAAGAGGGATGCTTGTGATACCATCCCTGAAGCCAGTCGAGCATGTACCGAGGATTTTAATGTTTCTAATTCTGTTGTTCTATCCCAGAAGGTGGCTGAGGGCGTTGATTGTTCTCATGAAAATATGAATCAGACACAAGGTGGTTCAACAACCTGGCAGCAGACGTCTTCATCGTTGCTTGGTCTTGTTGATGTGATATATTCTATATTTAGTTCCATCCAATGCTCTCCAATCACAAAAGAGGAGCTCCTGCATAAGATAATAATGAACACTTTAGATTTTGTTGAGATGAGAGAAGCTGAAGAGCAGATTGATTTTCTTGAAAAGGCAGTGCCAGATTGGATCTACAGGAAGTTGGGCCCTAGTGGAGATACTATGTACTGTATCAAGGAAGCGTCAGATTTGGAGTCTGTTCGATCAAGGCTATCCAGCAATAGCCTTAAGGCTTTATGGCTCAGAGAGCTTGTATCACTTACAGATGGACTTATGATGTCTTCCTTAGTTTTCGTGGTGAGGATACTCGACTGA 1692 0.4001 MDQKISEEGGQSGLNFKCAKILHGADKSVAIQTPEKTSEPLPTNSKEGSPQLPKTYKALADLFDNMSCSLRLLCLCKKSTTFQNICSQVEVLAKRKFLYTDLAQIKYLLPEAIHIEKVLVHESRNLCMKPDLKITLVHDVLLGHSGENTYMALRQLFGSRLLEFFNTHPDNTDIPEATLPEPFQQRTHSLICEDLPVDPSTIRSSSSSDQNQQLLQECQPYPFKRHFSKKNVVAETENNVVSSQIAQSHHSSDCLDNEGGEGDNEWQKKRLTSYLKSDSTNDQDMEKGQQNESCSVEFHCSVNTPARLICSPQSVSCGSYESSYIKITSSTDILMTETPAQSTPRRVAPSSDVKPKILTAQNSISGNKHVKRVLFSHEGDYDADKLESKRDACDTIPEASRACTEDFNVSNSVVLSQKVAEGVDCSHENMNQTQGGSTTWQQTSSSLLGLVDVIYSIFSSIQCSPITKEELLHKIIMNTLDFVEMREAEEQIDFLEKAVPDWIYRKLGPSGDTMYCIKEASDLESVRSRLSSNSLKALWLRELVSLTDGLMMSSLVFVVRILD 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1809 563 Pfam DNA replication factor CDT1 like 52 117 IPR014939 -
Lele06g1809 563 Gene3D - 437 536 IPR038090 -
Lele06g1809 563 MobiDBLite consensus disorder prediction 241 265 - -
Lele06g1809 563 SMART CDT1_2 52 181 IPR014939 -
Lele06g1809 563 SUPERFAMILY "Winged helix" DNA-binding domain 50 183 IPR036390 -
Lele06g1809 563 CDD Cdt1_m 33 190 IPR014939 -
Lele06g1809 563 PANTHER DNA REPLICATION FACTOR CDT1 39 531 IPR045173 GO:0003677|GO:0030174|GO:0071163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1809 Lele-ChrLele06 12614225 12619891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1809 450 530 Core DNA Replication Machinery Family AT3G54710 44.444 3.85e-14 73.2