Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1808 ATGAGAAAGATAAGAACAATTGATTTGGATAAGACTGCCATAGAAGAATTACCATCTTCCGTTTGCAATCTGATTGGGCTCGAAAGCTTAAACATGGATGAGTGTCATAATCTTAAACAGTTGCCAGCTGTCATTTGTATGATGCCAAACCTTTGGACAATAACAGCAAACTTTTGTGAAGGGTTGAGACATTTTATTAAGATGTATGGAAGTGAAAGAGAAGCAAACTCAGCAGTGTCTATAAAATTGGAACATGTTTGTTTCTCAAATTGCAATTTATCAAATGCTTCTCTTGATTTTTGTCTTTCTTACTTCCCTAATCTGATACAGTTGGATCTAAGTTCTAATAATTTCACAACCCTTCCTGCATCCATTAAAGAATGTCACCGTTTGAAGTATCTTTCCTTGGATAATTGCAACATGCTTCAACATATTGAAGGGATGCCACCAAACCTAGAAAAATTTAGTGCCTTATATTGCACATTGTTGAGTGAGCCATCAAGAGGGATGGTATTGAATCAGTTGCCAACAATTTATATGTGGATCCTTGTCAAAGACGATGACCAAGTTTCTCTCCATGATGACTGTAAATTCTCTGTACGCGTCAATGACACTGTGCAAGAAATTTCTTCAGGGTGGCTTTCACTTTCAACAATCAAGACATATCACGTATATCTTAGTGATCTGCAAAGTATAGTTCGCAAGGTTCAACTATCCCACATGGATAAATGGAATCATGTGAAGGTTTCCATCGGGAACAACAGAACACAGCAAGAAATGAGAAGTAAAAGGGAAATTTATTTTGCAGTTCACGTGTACAAGCAAGGAAATTATGTTGAGAATATCGAGTTCATGAACCCTAAAGCATGCATTAATTACTATCCATGGAAGCTAATTCAACAACCAGAAGATTTGGAACAAGTTGAAGATGCTATGAATCAAGATTCAAAATCAACCAATTCTGCAGAGTTCACTCAGAACTGCACAAGTTATCAAGATATTGGCCCAAATTTGTGGTCCATCTCCAAATTTAGTGAGAGGAAGGTAGGGCGAAGTAGTTTGATCCGAAGTAAACATAATGGCATTCTGAAGAAAATAAGGAGATGGCGGGAAGATCATCCCATGATCTTGGAGTCTAATTATCTGACCGCTATGGCTGTGACGGCTCACCGATTGATTGAATCGTTGGAGAACATGCACTGGAACAAAGAGGACCAAGAGTACAATTTTCTGCTGATGAATGATCATAAAATTCAAACAGCTAAGGAACAAGTTAAGGTCGAGTTCAGACAATTGCTAGTTCAAAATAGGCATCCTTTTGAGCATAGTTCCATCCCCTTTCGGTCCAGTACTGGTGAATTCCAAAGAGATAGTAGTGTCAGCAGAGAATCAGAGAAGCACAACATCATTGTTTTAGTCAGCCCAGAACTGCTCCAACTTATTAGATGTATTGCAAACTTAATGGTTGCTTTAGACTATAGCCGAGAATGTTACAATAACTACACCAACGTTCGAAGGCACGCCTTAAATGAGTGTCTGTTCAATCTTGAAATGGAAAGACTGAGTACTGACAATGTTTCAAGAATGGAGTGGGATGGTTTGAACTCCAAAATCAAAGCATGGATTTATCAAGCGAAAATATTTGTTAGGGTTTATCTTGCAAGAGAGAGGTGGCTTAGTGACCAGATTTTTGGGGACAGTACTGAGGCCAGTTTGACTTGTTTTATTGGTGCATCAAAGGCTTCAATATTGAGGCTTCTGAATTTTTGTGAAGCTATATCTGTTGGCTCCCACAAGCCTGAGAGAATATTTCGATTTCTTGACATGTACCAAGCTCTTGCAGATCTTATACCAGACCTAGATGCCTTGTATTCAGATCATGAAGTTGGTTCTCCAGTTAGAATTAAGTGTCAAGCGGTTCTTAACAGATTAGAAGCTTGTGTGAGGTCAATATTTCTTGAATTTAAAAATGCCATTGCATTAAGTCCACCTCGATCCCCTTTCCCAGGTGGTGGGATACATCCCTTGACCTATTATGTCATGAGTTATATTGGCTATCTATTCGACTACAAAAAAACCCTAAATATACTGAATGATGAAGACGAAGAAGACGATGACGATATTTCACTGTCCCCTGAAAGGAGCCATGACACATCAAAATATAGTGCTTCCTCGGTCATGATCCACTTCAGACCAGTCACTTCAATCTTGGAATCGAATCTTTATAACAAGTCCAAGTTATACAATGAAGCTGCCTGTCAACACTTTGCATCTGCAAGTACGAGGAGCATGCATGGAACTACGAGCAAGCTAGTTGGAGCTCGCTTCTCTCTTTGCTTAAGGATGAGGAAATCCAAATATCTTGTGTGTCGTCAGAAAATCTTCTCAAGAACAGATTATGGAGCTTCTACCTTGCCTTTGAGAATATTTACAGGATCCAAACTGCTTGGGTGA 2454 0.3896 MRKIRTIDLDKTAIEELPSSVCNLIGLESLNMDECHNLKQLPAVICMMPNLWTITANFCEGLRHFIKMYGSEREANSAVSIKLEHVCFSNCNLSNASLDFCLSYFPNLIQLDLSSNNFTTLPASIKECHRLKYLSLDNCNMLQHIEGMPPNLEKFSALYCTLLSEPSRGMVLNQLPTIYMWILVKDDDQVSLHDDCKFSVRVNDTVQEISSGWLSLSTIKTYHVYLSDLQSIVRKVQLSHMDKWNHVKVSIGNNRTQQEMRSKREIYFAVHVYKQGNYVENIEFMNPKACINYYPWKLIQQPEDLEQVEDAMNQDSKSTNSAEFTQNCTSYQDIGPNLWSISKFSERKVGRSSLIRSKHNGILKKIRRWREDHPMILESNYLTAMAVTAHRLIESLENMHWNKEDQEYNFLLMNDHKIQTAKEQVKVEFRQLLVQNRHPFEHSSIPFRSSTGEFQRDSSVSRESEKHNIIVLVSPELLQLIRCIANLMVALDYSRECYNNYTNVRRHALNECLFNLEMERLSTDNVSRMEWDGLNSKIKAWIYQAKIFVRVYLARERWLSDQIFGDSTEASLTCFIGASKASILRLLNFCEAISVGSHKPERIFRFLDMYQALADLIPDLDALYSDHEVGSPVRIKCQAVLNRLEACVRSIFLEFKNAIALSPPRSPFPGGGIHPLTYYVMSYIGYLFDYKKTLNILNDEDEEDDDDISLSPERSHDTSKYSASSVMIHFRPVTSILESNLYNKSKLYNEAACQHFASASTRSMHGTTSKLVGARFSLCLRMRKSKYLVCRQKIFSRTDYGASTLPLRIFTGSKLLG 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1808 817 Gene3D Exocyst complex component Exo70 359 757 - -
Lele06g1808 817 ProSiteProfiles Leucine-rich repeat profile. 107 128 IPR001611 GO:0005515
Lele06g1808 817 SUPERFAMILY Cullin repeat-like 389 756 IPR016159 -
Lele06g1808 817 SUPERFAMILY L domain-like 3 233 - -
Lele06g1808 817 PANTHER EXOCYST COMPLEX PROTEIN EXO70 352 756 IPR004140 GO:0000145|GO:0006887
Lele06g1808 817 Pfam Exo70 exocyst complex subunit 539 756 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lele06g1808 817 Gene3D Ribonuclease Inhibitor 1 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1808 Lele-ChrLele06 12601180 12604688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1808 418 756 EXO70 exocyst subunit family AT3G29400 40.970 3.51e-80 269