Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1788 ATGGCATTAGTAAATTCAACTAGTGTGGTCAAATTTGGTGCTTTACTGGATTCTGCGGTTGTTCCTATACCTCTCATTGAGCAACTTCATTCTCTTGTATCCTGCAGTTGCTTCTTTGTTAGGGTGAGTTTCAGTTTTCTTGAATTTAATCTGATAGTCATGATACTGATGATTGTTCCCCTTGTCCAGATCTTAGAGGGCCTTCTTAAGCTGCCTGAAAACAAGGAATGTGCTGACTGCCGAAACAAGGCACCACGATGGGCAAGTGTGAATCTAGGAATTTTCATATGCATTCAATGTTCAGGAATTCACCGAAGTCTTGGAGTGCATATATCAAAGTGGGTGAATTTCGTTATAGCAATATCTGGGCTTTTTGTTCCTGGGAGAGCCATAGTTCAGTGGAATACGCTTCAACTACTATTGTCTAAGGTGCGGTCTACAACTTTGGATACATGGTTGCCGGAACAAGTCTCTTTCATGCAATTCATCGGTAATTTGAAGTCAAATGAGCATTGGGAGGCAGAACTGCCACCAAATTTTGATATAACTGGCTTCAGACTTGAGAAGTTTATTCGTTCCAAGTATGTGGAGAAAAAGTGGGCTAAAGTTGGTGGAGTAAATCCAGCTTCAAAAGCAGGTGAAATCATCTGTAATCTGAATCTGAATGTGTCACCAGCTGGTACCAAGGGCGGCTTTTCCAGGGCCAATAGAAGGCTTTCTCTTGAGGAAAGCATTCTTACAAAACACATGGAACAGATCCTTCCTCAAGTGAGGCGACATCGTGGGGGTTCTCTTGACATTCCAAAAAGTACTACCCCACCGGTAAGGAGGCCATGCCCATCGGTTGATTTCGATAAGTCCCTTCTAAGCAATGGCAATGCTGACTTTTTCAGCATGTTTGGCGTCCATGGCGATAAGAAGGACTCTGTAACTGTGCCTCCTACTAGCTGGACAACTTTTGACTTCAAGAACATTATAGAATTGCTCTTATGTCATTCTTTCTATTTGGCTTGTCTCAAGACTACAATTCTGGTCCCAATTTTTGCTTTGCTGAATTACTGA 1062 0.4228 MALVNSTSVVKFGALLDSAVVPIPLIEQLHSLVSCSCFFVRVSFSFLEFNLIVMILMIVPLVQILEGLLKLPENKECADCRNKAPRWASVNLGIFICIQCSGIHRSLGVHISKWVNFVIAISGLFVPGRAIVQWNTLQLLLSKVRSTTLDTWLPEQVSFMQFIGNLKSNEHWEAELPPNFDITGFRLEKFIRSKYVEKKWAKVGGVNPASKAGEIICNLNLNVSPAGTKGGFSRANRRLSLEESILTKHMEQILPQVRRHRGGSLDIPKSTTPPVRRPCPSVDFDKSLLSNGNADFFSMFGVHGDKKDSVTVPPTSWTTFDFKNIIELLLCHSFYLACLKTTILVPIFALLNY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1788 353 SUPERFAMILY ArfGap/RecO-like zinc finger 63 114 IPR037278 -
Lele06g1788 353 Pfam Putative GTPase activating protein for Arf 64 113 IPR001164 GO:0005096
Lele06g1788 353 Pfam Putative GTPase activating protein for Arf 134 202 IPR001164 GO:0005096
Lele06g1788 353 ProSiteProfiles ARF GTPase-activating proteins domain profile. 62 208 IPR001164 GO:0005096
Lele06g1788 353 SMART arf_gap_3 63 208 IPR001164 GO:0005096
Lele06g1788 353 CDD ArfGap 65 195 - -
Lele06g1788 353 SUPERFAMILY ArfGap/RecO-like zinc finger 137 201 IPR037278 -
Lele06g1788 353 PRINTS HIV Rev interacting protein signature 144 165 IPR001164 GO:0005096
Lele06g1788 353 PRINTS HIV Rev interacting protein signature 74 93 IPR001164 GO:0005096
Lele06g1788 353 PRINTS HIV Rev interacting protein signature 93 110 IPR001164 GO:0005096
Lele06g1788 353 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 63 114 IPR044520 GO:0005096
Lele06g1788 353 Gene3D Arf GTPase activating protein 61 204 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1788 Lele-ChrLele06 12418148 12426479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1788 65 200 C2H2 Transcription Factor Family AT3G07940 38.732 1.78e-21 90.9