Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1784 ATGTCTCAACATTCCACGTCACTATCCACGTGGGAATTCTTTAATTGCTTCCACCTACGGTTTCTCTGTTTTGCTGGAAAGCGGAGCGGAGTGAGAGGTGCGCTGTTTGGCTTGAGACACCGAACGATCACCGGTTTTCCCTTTAGAAGAAACTGGGTTTGCAGGTGGCATGTTCATAGCTTCACCTTTCTGAGTGAGCTTGAGTTATTGTTGTGTCTGTCGATGTTGCAGTTGCAGATCTACTATTCTGGACTCTACTTGATGTGGGTTTCGTGGATGTACTTGTTTTCAGCGACTTTTGTGTTTTTAATTCTTGAGTTCTGTTCGTCGAAAGTCTTCATCATGGTGAGAAAGAAGAGAACTGAAGTTCCTAGTGGAGGTGAAAGCTCTGAGACTCATGAAAGTGGGGGAAGCGGAAGAGGAGGTGTTCAGCGCCCTCCAGAAAGGAGTGCTCAAGGCCCTCAACAGTCTGCTGGAGGATCCCAAGGAGGTAGAGGCTGGTATCCTCAAGGAGGGCGTGGGGGTTATGGGGGACGTGGTCGTGGTCCACCCCAACAGCAGTACAGTGGCCCCCCTGATTATCAAGGCAGGGGAAGGGGAGGATCTTTTCAACAGGGAGGTCGTGGTGGATTTCGTGGTGGTCGGGATGGTGCGGGCATAAGTGGACGTGTTGGAGGACCTTCATATGGTGTCCCATCCCGACCAGAAGTTCCCGAGCTGCACCAAGCAACCTCAGCTTCATATCAAGCTGGGGTGACTCCTCAGTCTGCGATATCTGAGGCCAGTTCTGTTTCACAACTTCCTGAGATGACACATGTGGAACAGCAAACTAAGCAGTTAACCATTCATCCAGAAGTTTCTTCTGCCCCTCCAGCCTCAAGTAAATCAGTGAGGTTTCCCCTTCGGCCTGGAAAGGGTAGCTATGGCACAAAGTGTATAGTTAAAGCTAACCACTTCTTTGCTGAGTTACCTAACAAAGATCTTCACCAGTACGATGTAACCATAACTCCAGAAGTGCCATCTAGAGGTGTAAACCGTGCTGTTATGGAGCAGCTGGTTAGGCTGTACCGTGAGTCTCATCTAGGCATGAGACTACCTGCATATGATGGTCGCAAGAGCTTGTACACTGCTGGTCCTCTTCCTTTTGTTTCAAATGAGTTTAGAATCACTCTCATTGATGAAGAGGAAGGAGCAGGAGCAGGCGTTCAAAGGAGAGTGAGGGATTTCAAAGTTGTGATAAAATTAGCTGCCCGAGCTGACCTTCACCACTTAGGAATGTTTTTGCAAGGAAGGCAAACAGATGCACCTCAGGAAGCCCTTCAGGTTCTTGACATTGTTCTACGTGAACTACCGACCACTAGGTATTGTCCTGTCGGAAGATCTTTCTATTCACCTGATATAGGGAGGAGGCAACCATTAGGTGAGGGTTTAGAGAGCTGGCGTGGGTTTTACCAAAGTATCCGTCCAACTCAGATGGGATTATCACTAAACATTGATATGTCGTCAACGGCATTTATTGAACCATTGCCAGTAATTGATTTTGTCACTCAGCTGCTGAACAGGGATGTCACCTCCCGTCCATTATCTGATGCTGATCGTGTAAAGATAAAAAAAGCACTTCGTGGGGTCAAAGTTGAAGTAACACACCGTGGAAACATGAGAAGAAAATATCGCATCGCTGGCTTGACATCACAGGCAACTAGAGAGCTGACATTCCCTGTTGATGAGAGGGGGACTGTGAAATCTGTTGTGGAGTACTTTTATGAGACATACGGATTTGTCATTCAACATACTCAGTGGCCTTGCTTACAAGTGGGAAATGCAAATAGACCAAACTATTTACCGATGGAGGTTTGCAAGATAGTAGAAGGTCAAAGGTACTCAAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTTAAAGTCACCTGTCAGCGACCTCTTGATAGGGAGCGAGATATCATGCAGACGGTTCATCATAATGCTTACCATGAAGATCCTTATGCTAGAGAGTTTGGAATCAAAATCAGCGAGAAACTTGCGCAAGTTGAAGCTCGCATTCTTCCTGCACCTTGGTTGAAGTATCATGATACAGGAAGAGAAAAGGATTGTCTTCCTCAGGTTGGCCAGTGGAATATGATGAATAAGAAAATGGTCAATGGGGGGACTGTTAACAACTGGATGTGCATAAATTTTTCAAGGAATGTTCAAGACAGTGTGGCCGGTGGCTTTTGTTATGAACTTGCACAGATGTGTTATATATCTGGCATGGCATTTAATCCAGACCCAGTGCTTCCTGTGATCAGTGCTCGCCATGACCAGGTGGATAAGGTTCTGAAATCACGCTATCATGATGCCAAGGCAAAGCTGAAGGACAAAAAGGATCTTGATCTGCTTATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGATCTGAAACGTATTTGTGAGACGGATCTTGGGGTTGTTTCCCAGTGCTGTTTGACAAAACATGTCTTTAAAATGAACAAGCAGTACCTTGCAAATGTTGCTTTAAAAATCAACGTGAAGGTTGGTGGAAGGAACACAGTGCTTGTTGATGCACTTTCAAGACGCATACCTTTAGTTAGTGATCGACCCACAATTATATTTGGAGCTGATGTTACTCATCCACACCCTGGGGAGGATTCTAGTCCATCGATAGCAGCTGTTGTGGCATCTCAAGATTGGCCTGAAATCACCAAGTATTCAGGTCTGGTTTGTGCTCAAGCACACAGGCAGGAGCTCATCCAAGACCTTTTCAAACAGTGGCAAGATCCATTGAGGGGGACAGTGACTGGTGGAATGATAAAGGAGCTTCTCATATCTTTTCGAAGAGCCACAGGGCAGAAGCCACAACGCATCATATTTTACAGGGATGGTGTGAGTGAAGGGCAATTTTATCAAGTTTTACTTTTTGAGCTTGATGCTATCCGCAAGGCATGTGCATCATTAGAACCTAACTATCAGCCTCCTGTCACTTTTGTGGTGGTTCAAAAGCGCCATCACACAAGGCTGTTTGCTAACAATCACCATGATCGGAATTCGGTTGACCGTAGTGGGAATATATTGCCTGGTACGGTCGTAGACTCCAAAATTTGTCATCCAACTGAGTTTGACTTCTATCTTTGTAGCCATGCTGGGATACAGGGTACAAGCCGACCTGCCCATTACCACGTGTTATGGGATGAAAACAATTTTTCTGCCGATGCACTTCAGACACTTACTAACAACCTCTGCTACACTTATGCAAGATGCACGCGATCTGTTTCAATCGTTCCTCCTGCATACTATGCACACTTGGCAGCTTTCCGAGCTCGATTTTATATGGAACCTGCTACATCGGATAGTGAGTCTATGAGTGCTGCTGCCGGACGAGGAGTGGGCGGCGGCCCGGGACGTAGCACTCGTGCACCTGGTTCAAGTGCTGCGGTCAGGCCTCTTCCTGCTCTTAAGGATAATGTGAAGAGGGTCATGTTTTATTGTTAA 3513 0.4614 MSQHSTSLSTWEFFNCFHLRFLCFAGKRSGVRGALFGLRHRTITGFPFRRNWVCRWHVHSFTFLSELELLLCLSMLQLQIYYSGLYLMWVSWMYLFSATFVFLILEFCSSKVFIMVRKKRTEVPSGGESSETHESGGSGRGGVQRPPERSAQGPQQSAGGSQGGRGWYPQGGRGGYGGRGRGPPQQQYSGPPDYQGRGRGGSFQQGGRGGFRGGRDGAGISGRVGGPSYGVPSRPEVPELHQATSASYQAGVTPQSAISEASSVSQLPEMTHVEQQTKQLTIHPEVSSAPPASSKSVRFPLRPGKGSYGTKCIVKANHFFAELPNKDLHQYDVTITPEVPSRGVNRAVMEQLVRLYRESHLGMRLPAYDGRKSLYTAGPLPFVSNEFRITLIDEEEGAGAGVQRRVRDFKVVIKLAARADLHHLGMFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDIGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVTSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRIAGLTSQATRELTFPVDERGTVKSVVEYFYETYGFVIQHTQWPCLQVGNANRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPLDRERDIMQTVHHNAYHEDPYAREFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWMCINFSRNVQDSVAGGFCYELAQMCYISGMAFNPDPVLPVISARHDQVDKVLKSRYHDAKAKLKDKKDLDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMNKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYSGLVCAQAHRQELIQDLFKQWQDPLRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPATSDSESMSAAAGRGVGGGPGRSTRAPGSSAAVRPLPALKDNVKRVMFYC 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1784 1170 FunFam protein argonaute 10-like 867 1170 - -
Lele06g1784 1170 Pfam Piwi domain 799 1118 IPR003165 GO:0003676
Lele06g1784 1170 SMART Piwi_a_2 798 1119 IPR003165 GO:0003676
Lele06g1784 1170 Pfam Argonaute linker 1 domain 457 507 IPR014811 -
Lele06g1784 1170 ProSiteProfiles PAZ domain profile. 509 623 IPR003100 GO:0005515
Lele06g1784 1170 SMART PAZ_2_a_3 513 645 IPR003100 GO:0005515
Lele06g1784 1170 CDD Piwi_ago-like 667 1118 IPR045246 -
Lele06g1784 1170 SUPERFAMILY Ribonuclease H-like 785 1120 IPR012337 -
Lele06g1784 1170 FunFam Argonaute 10 687 861 - -
Lele06g1784 1170 Pfam N-terminal domain of argonaute 311 447 IPR032474 -
Lele06g1784 1170 MobiDBLite consensus disorder prediction 1128 1152 - -
Lele06g1784 1170 Gene3D paz domain 502 627 - -
Lele06g1784 1170 MobiDBLite consensus disorder prediction 123 236 - -
Lele06g1784 1170 Pfam Argonaute linker 2 domain 649 695 IPR032472 -
Lele06g1784 1170 Pfam Glycine-rich region of argonaut 190 289 IPR024357 -
Lele06g1784 1170 Gene3D - 687 861 - -
Lele06g1784 1170 SMART DUF1785_2 456 508 IPR014811 -
Lele06g1784 1170 MobiDBLite consensus disorder prediction 270 294 - -
Lele06g1784 1170 MobiDBLite consensus disorder prediction 149 163 - -
Lele06g1784 1170 Pfam Mid domain of argonaute 706 781 IPR032473 -
Lele06g1784 1170 SUPERFAMILY PAZ domain 313 660 IPR036085 GO:0005515
Lele06g1784 1170 Gene3D - 867 1170 IPR036397 GO:0003676
Lele06g1784 1170 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 289 1120 - -
Lele06g1784 1170 ProSiteProfiles Piwi domain profile. 798 1119 IPR003165 GO:0003676
Lele06g1784 1170 Pfam PAZ domain 513 638 IPR003100 GO:0005515
Lele06g1784 1170 FunFam Protein argonaute-2 502 628 - -
Lele06g1784 1170 MobiDBLite consensus disorder prediction 270 301 - -
Lele06g1784 1170 CDD PAZ_argonaute_like 508 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1784 Lele-ChrLele06 12357154 12364329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1784 193 1170 Eukaryotic Initiation Factors Gene Family AT1G48410 80.691 0.0 1603