Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1765 ATGTGCAGTAGAGGCCATTGGAGGCCAGCCGAGGATGAGAAACTTCGAGAATTGGTGGAGCGTTATGGAGCCCATAACTGGAACGCCATAGCTGAAAAGCTTCGAGGAAGATCAGGGAAAAGCTGCAGGTTGAGGTGGTTCAATCAACTGGACCCAAGAATAAACCGGAGTCCATTTACAGAGGAAGAAGAAGAAAAGCTTGTGGCATGTCACAGGATGCATGGGAACAGATGGGCAGTTATAGCGAGGCATTTTCCAGGAAGAACTGATAATGCTGTGAAGAATCACTGGCACGTTATGATGGCCAGAATTCGCCGTGAAAGCTCCAAGCTCTCTGCGAAACGCCCTCATCTTCATCAACAGTGTTCTTCACCCCCGCCAATAATATCATCAGATCCTACTACTAATAATAGTAGTGTTGTTCCTTCTTTCGTTGAGAAATACTATGACAAGCATGCCTTCCCTGCTTATTGTCTCCCTTATAACCCTTTCCTCCTTCATTTCCCCAACAATAAGTTTCTTCATCTTCAACTTCCAACTCGCTCTTCTTCAGTACTTCATGATAAAAGTGAATCGGTTGAGTTCTACGACTTTCTGCAAGTGAACACAGATTCTAATAATAGAAGCGACGTGACAGACAATGCCAGAAGAGAAGACGAGGAAGTGAATCAAGAGAATGTGGGAGGAGGAGGAGGACGACAGAACAAAGATGGTGATGGTGTTCCGTTTATCGATTTTTTGTCTGTTAATGGAAGAAGCTCCTAA 765 0.4458 MCSRGHWRPAEDEKLRELVERYGAHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEEKLVACHRMHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRESSKLSAKRPHLHQQCSSPPPIISSDPTTNNSSVVPSFVEKYYDKHAFPAYCLPYNPFLLHFPNNKFLHLQLPTRSSSVLHDKSESVEFYDFLQVNTDSNNRSDVTDNARREDEEVNQENVGGGGGRQNKDGDGVPFIDFLSVNGRSS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1765 254 MobiDBLite consensus disorder prediction 117 136 - -
Lele06g1765 254 PANTHER MYB PROTEIN-RELATED 4 129 - -
Lele06g1765 254 SMART sant 3 52 IPR001005 -
Lele06g1765 254 SMART sant 55 103 IPR001005 -
Lele06g1765 254 FunFam MYB transcription factor 4 55 - -
Lele06g1765 254 Pfam Myb-like DNA-binding domain 4 50 IPR001005 -
Lele06g1765 254 Pfam Myb-like DNA-binding domain 56 99 IPR001005 -
Lele06g1765 254 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Lele06g1765 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Lele06g1765 254 Gene3D - 4 55 - -
Lele06g1765 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Lele06g1765 254 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Lele06g1765 254 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Lele06g1765 254 CDD SANT 58 101 IPR001005 -
Lele06g1765 254 CDD SANT 7 48 IPR001005 -
Lele06g1765 254 MobiDBLite consensus disorder prediction 206 242 - -
Lele06g1765 254 Gene3D - 57 124 - -
Lele06g1765 254 MobiDBLite consensus disorder prediction 210 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1765 Lele-ChrLele06 12183875 12185517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1765 1 254 MYB Transcription Factor Family AT1G17950 50.758 1.08e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g1765 Myb_DNA-binding 1.7e-15 CL0123