Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1756 ATGGAAGGAGGAGGAGGAGATCACAGTAACTCATCGAATTCTATCTACAGAGAGTGTCTGCGAAACCATGCAGCCAACCTCGGCAGCTACGCCACAGACGGCTGCGGCGAGTTCACCCTCGACGACTCATCTCCCGGGTGTCTACAATGCGCCGCCTGTGGCTGCCACCGGAACTTCCACCGTAAGATGACTTGCCCGCCACCTCCAAGGGGGTTCAGCCGGCCGGAGCTGACGGGAGAGCTGATGGAGTACAGCGGCGGTGAGGGGACGCCGCCGAGCAGCGGGATGATGGAGGCAGGAGAGAGGACGACGTCGGCCGGGACAGGGAAGAAGAGATTCAGGACAAAGTTCACGGCGGAGCAGAAGGAGAAGATGATGGGATTTGCAGAGAAGCTGGGGTGGAAGTTGCAGAGGAAGGATCTAGACGATGAGATACAGAGATTCTGCAGAGGATTGGGAGTGAGTAGACAAGTGTTCAAGGTTTGGATGCATAACCATAAGAACTCTTCGTCTTCTTCCTCTGCTTCTACTGGCAATGCCTCCTCTCTTACCCAGTAA 558 0.5609 MEGGGGDHSNSSNSIYRECLRNHAANLGSYATDGCGEFTLDDSSPGCLQCAACGCHRNFHRKMTCPPPPRGFSRPELTGELMEYSGGEGTPPSSGMMEAGERTTSAGTGKKRFRTKFTAEQKEKMMGFAEKLGWKLQRKDLDDEIQRFCRGLGVSRQVFKVWMHNHKNSSSSSSASTGNASSLTQ 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1756 185 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 16 63 IPR006456 -
Lele06g1756 185 FunFam Zinc-finger homeodomain protein 2 97 172 - -
Lele06g1756 185 SUPERFAMILY Homeodomain-like 103 168 IPR009057 -
Lele06g1756 185 Pfam ZF-HD protein dimerisation region 15 63 IPR006456 -
Lele06g1756 185 MobiDBLite consensus disorder prediction 165 185 - -
Lele06g1756 185 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 169 - -
Lele06g1756 185 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 16 62 IPR006456 -
Lele06g1756 185 Gene3D - 95 174 - -
Lele06g1756 185 MobiDBLite consensus disorder prediction 85 109 - -
Lele06g1756 185 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 110 168 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1756 Lele-ChrLele06 12075068 12075625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1756 16 169 ZF-HD Transcription Factor Family AT4G24660 47.953 3.94e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele06g1756 ZF-HD_dimer 1.8e-22 No_clan