Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1740 ATGAGCTTCCATCGGCGAAGCAGAAGAGCAGAAGAAGTCGACGACGACGACGACGAGGAAGAGGAAGAACGAGTTCGGAGTTTGGGTTTATCTGTTAATCCCACTCATCTTTGCGCCAACTTCTTCATTCATCCCCATAATTGGTGGTACGTAGTGTGGAAGCATTTCATTCTCATATGGGCAGTTTACTCTTCATTCTTCACTCCCATGGAGTTCGGCTTCTTCAGAGGCTTGCCCGAGGATATCTTCCTCCTCGATATTGCTGGCCAATTTGCTTTCCTCGTCGATATCGTCACCCGATTTTTCCTCACCTATCGTGACACCTCCTCAAATACCTGGGTCCTCGATCACCGTCAAATCGCCAAGAGGTATTTGAAGTCTCGGTTCACCCTTGATTTTCTGAGTTGTCTTCCCTGGGATTATATCTATAAGGCTGCTGGCAGGAAAGAGGCAGTGAGGTATCTTCTATGGATCAGGCTATGGCGAGCATGTAGAGTGATTGAATTTTTTGAGAGGATGGAGAAAGATCTTAGGATCAATTACCACTGTACTAGAATTGTGAAACTTCTTGTTGTTGAACTCTATTGCACGCATACGGCTGCCTGCATCTTCTACTATCTTGCTACCACTTTGCCCCCCTCCAAGGAAGGTTATACATGGATAGGCAGCTTGACAATGGGTGACTACAGCTATTCGGAATTTAGACATATTAGTCTCTGGAGGCGTTATGTGACATCACTCTACTTTGCAATTGTTACCATGGTAACTGTTGGCTTTGGGGAAATTCATGCAGTCAATGTCAGGGAAATGATATTTGTCATGATATATGTTTCCTCTGACATGATTTTGGGTGCTTATCTTCTTGGTAACATTACAGCATTGGTTGTGAAGGGATCAAGAACAGAGAAGTTTAGGGACAAAATGTCTGAACTTAGCAAGTACATGAATAAAAATAATTTGGACAAGCAGATCACTAAGGAGATTAGAGGCCATTTGCGGTTACAGTATGACCGCAGTGACACTGAGGCTGCTATTGATGAAGATATTCCCGTTTCTATCCGTACAAAGATTTCGATGAATTTGTATGAGCAATTCATTCAGAAAGTTCATCTTTTCAAGGGATGCTCTTCTGGGTTCATTAAACATGTTGCAATCAATGTCCATGAGGAGTTTTTTCTCCCAGGAGAAGTTATTATGGAGCAAGGAGATGTAGTAGATCAACTTTACCTTGTATGCCATGGTGAGCTGGATGAGCTAAGAAAGGAAGATGATGGAAGAGAACAGTTAGTTAAGCAATATCAAACCTATAGTTCCTTTGGCGATGTTTCCTTTCTTTGCAATTTGCCTCAACCTTACATGGTTCGCGCTTGCGAATTTTGCAAAGTTCTGCGTCTAGATAAGCTATCCTTTACAGAAACACTCAAGACATACTTCTTAGATGCTCGGGTTATCTTGCAAAATCTTCTTCAGGGAAAAGACTCTGATCTTCAGTATAAGCTTTTGGAATCAGACTTCACCCTGACAAATGGAAATCGTGAAACAGAACTGGCTATGAGGATTAATTGTGCTGCCTATGAGGGGGATTTCTATCTTATGAAACATTGGATTGAATCAGGAATAGATCCCAACAGAACTGATTATGATGGAAGATCACCTTTGCATATTTCTGCATCCAAAGGATATGTAGATATTTCTCGCTTTCTTATTGACAAAGGAGCGAATATTGACTTATCAGATAAGTTGGGGAACACTCCCTTGTTTGAAGCTATAAAGAATGGACATGAAGAAGTAGCTTCTTTACTTGTAAATAAGGGGGCTACTCTTACTATTGAAGATGCTGGAAGTTTTCTGTGCATGACTGTTGCAACGAAGGAGCTGGACCTTCTAAGAAAGCTTTTAGCATATGGCATAAATCCAAATTCTAGAAATTACGATCAACGAACTGCTCTTCACATAGCTGCCTCGGAGGGTTTGTTCACAGTTGCTGAAATGCTCATAGAAGCAGGAGCAAGTGTTTCTTCAACGGACAGGTGGGGACATACACCACTTGATGAAGCTCGCATAGGTGGAAATAGGAACATGATCAGATTGCTTGAAGTAGCAAAATTTTCTCAGCTGGCTGACATATCAGATGGTATTCAGGAAACACAAGAAACACTTTTGTCGCCATCAAGAGACAGAAGTAGGAAAAAGAAATGCACAGTATTTGATTTCCACCCATGGGATCATAATAAGGATGGAAGAGTAGGAGCTGCGCTGTGGGTTCCTGGAAGCATTGAAGAGCTAATAAAGATGGCAAGAGAACAATTAAAATCTCCCAATGGTTCCTGCATTTTATCTCAGCATGGTGCTAGAATTCTTGATGTAGACATGATCGGCAATGATGAGCATCTATTTCTAATAAGTGAACCACACATTGAGGGCCAAAGAATAGAAGACAAGTGA 2445 0.4155 MSFHRRSRRAEEVDDDDDEEEEERVRSLGLSVNPTHLCANFFIHPHNWWYVVWKHFILIWAVYSSFFTPMEFGFFRGLPEDIFLLDIAGQFAFLVDIVTRFFLTYRDTSSNTWVLDHRQIAKRYLKSRFTLDFLSCLPWDYIYKAAGRKEAVRYLLWIRLWRACRVIEFFERMEKDLRINYHCTRIVKLLVVELYCTHTAACIFYYLATTLPPSKEGYTWIGSLTMGDYSYSEFRHISLWRRYVTSLYFAIVTMVTVGFGEIHAVNVREMIFVMIYVSSDMILGAYLLGNITALVVKGSRTEKFRDKMSELSKYMNKNNLDKQITKEIRGHLRLQYDRSDTEAAIDEDIPVSIRTKISMNLYEQFIQKVHLFKGCSSGFIKHVAINVHEEFFLPGEVIMEQGDVVDQLYLVCHGELDELRKEDDGREQLVKQYQTYSSFGDVSFLCNLPQPYMVRACEFCKVLRLDKLSFTETLKTYFLDARVILQNLLQGKDSDLQYKLLESDFTLTNGNRETELAMRINCAAYEGDFYLMKHWIESGIDPNRTDYDGRSPLHISASKGYVDISRFLIDKGANIDLSDKLGNTPLFEAIKNGHEEVASLLVNKGATLTIEDAGSFLCMTVATKELDLLRKLLAYGINPNSRNYDQRTALHIAASEGLFTVAEMLIEAGASVSSTDRWGHTPLDEARIGGNRNMIRLLEVAKFSQLADISDGIQETQETLLSPSRDRSRKKKCTVFDFHPWDHNKDGRVGAALWVPGSIEELIKMAREQLKSPNGSCILSQHGARILDVDMIGNDEHLFLISEPHIEGQRIEDK 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1740 814 ProSiteProfiles Ankyrin repeat profile. 581 613 IPR002110 GO:0005515
Lele06g1740 814 ProSiteProfiles Ankyrin repeat region circular profile. 548 580 - -
Lele06g1740 814 MobiDBLite consensus disorder prediction 1 20 - -
Lele06g1740 814 SMART cnmp_10 371 489 IPR000595 -
Lele06g1740 814 Gene3D Jelly Rolls 360 497 IPR014710 -
Lele06g1740 814 Pfam KHA, dimerisation domain of potassium ion channel 731 800 IPR021789 -
Lele06g1740 814 ProSiteProfiles KHA domain profile. 732 814 IPR021789 -
Lele06g1740 814 Gene3D - 50 297 - -
Lele06g1740 814 FunFam Potassium channel KAT2 359 495 - -
Lele06g1740 814 Gene3D - 517 700 IPR036770 -
Lele06g1740 814 ProSiteProfiles Ankyrin repeat profile. 645 677 IPR002110 GO:0005515
Lele06g1740 814 CDD CAP_ED 371 485 IPR000595 -
Lele06g1740 814 ProSiteProfiles Ankyrin repeat region circular profile. 581 612 - -
Lele06g1740 814 Pfam Ankyrin repeats (many copies) 632 686 IPR002110 GO:0005515
Lele06g1740 814 FunFam Potassium channel SKOR 51 296 - -
Lele06g1740 814 PANTHER POTASSIUM CHANNEL AKT1 31 802 IPR045319 GO:0005249|GO:0006813
Lele06g1740 814 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Lele06g1740 814 Pfam Cyclic nucleotide-binding domain 391 477 IPR000595 -
Lele06g1740 814 SMART ANK_2a 645 674 IPR002110 GO:0005515
Lele06g1740 814 SMART ANK_2a 678 707 IPR002110 GO:0005515
Lele06g1740 814 SMART ANK_2a 548 577 IPR002110 GO:0005515
Lele06g1740 814 SMART ANK_2a 515 544 IPR002110 GO:0005515
Lele06g1740 814 SMART ANK_2a 612 641 IPR002110 GO:0005515
Lele06g1740 814 SMART ANK_2a 581 610 IPR002110 GO:0005515
Lele06g1740 814 Gene3D Helix hairpin bin 299 359 - -
Lele06g1740 814 ProSiteProfiles Ankyrin repeat region circular profile. 645 677 - -
Lele06g1740 814 Pfam Ankyrin repeats (3 copies) 522 612 IPR002110 GO:0005515
Lele06g1740 814 ProSiteProfiles cAMP/cGMP binding motif profile. 371 491 IPR000595 -
Lele06g1740 814 PRINTS Ankyrin repeat signature 661 675 IPR002110 GO:0005515
Lele06g1740 814 PRINTS Ankyrin repeat signature 549 564 IPR002110 GO:0005515
Lele06g1740 814 PRINTS EAG/ELK/ERG potassium channel family signature 195 205 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1740 814 PRINTS EAG/ELK/ERG potassium channel family signature 454 462 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1740 814 PRINTS EAG/ELK/ERG potassium channel family signature 86 96 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1740 814 PRINTS EAG/ELK/ERG potassium channel family signature 287 296 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1740 814 PRINTS EAG/ELK/ERG potassium channel family signature 243 260 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele06g1740 814 SUPERFAMILY cAMP-binding domain-like 299 490 IPR018490 -
Lele06g1740 814 Pfam Ion transport protein 52 294 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele06g1740 814 SUPERFAMILY Voltage-gated potassium channels 44 296 - -
Lele06g1740 814 SUPERFAMILY Ankyrin repeat 517 698 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1740 Lele-ChrLele06 11929478 11935712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1740 629 698 Ion Channels AT5G37500 31.522 9.95e-06 47.4