Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1730 ATGGCGCCTCACAAGCTCTCTCTGTTGCTTCCCATCTTCCTCATTTTGCTTCCTCTGGTGAGACCAGATCTGGCTTCTGAGCGAGCTGCTCTGCTCGCTCTCCGTTCCTCTGTGGGAGGCCGAACCCTTCTCTGGAACGTCACCCAACAGAGTCACTGCACGTGGGCTGGCGTCCAATGCGTCCGTGACCAGGTCGTTGAGCTTCATCTTCCCGGTGTTGGCCTTTCTGGCAAGCTACCTAACGGCATTTTCGGTAACCTCACTCATCTCCAGACTCTCAGTCTGCGTGTCAACGCCCTGACTGGAAGTCTTCCTTCAGATCTCGCTTCTTGTGTCCACCTTCGGAATCTTTACTTGCAGCGAAACTTGCTCTCTGGAGAAATACCTGAATTCTTGTTCTCTTTACCTGACATGGTTCGCCTTAATTTAGCGCACAACAATTTTTCCGGTGTGATTCCACTGGAGTTCAACAAGTTGGTAAGGCTGAGGACTCTGTATCTTGAGAATAATCAGTTTTCAGGTTCCATTCCCGGGTTGAACCTGGCAAATCTCGAGCAGTTCAATGTGTCGAACAATTTGTTAAACGGCTCAGTGCCGGTAAAGCTACAGACATTTTCTGAAGATTCATTTCTAGGCAATTCACTGTGCGGGAAGCCACTCAAGCTTTGCCCAGGAGAAGGAGCCGCAATATCTCCGTCGGGCGAGATTGAGAACAGCAATAACGGAGGGAAGAAGAAGAAATTGTCTGGTGGGGCCATTGCTGGAATAGTCATTGGATCTGTTGTGCTTCTCCTGTTGATTGTGTTTGCTTTGATTCTTCTTTGTCGAAAGAAGAGTAGTAAGAACTCGAGATCTATCGACCTTGCAACAATGAAGCATCCAGAAACAGAAATTCCAGGCGACAAACGCGTTTCAGATGTGGAGAATAATAATGGTAATGGTCATGGTAATGGGTATTCGGTGGCTGCAGTAGCTGCAGCCGCCATGACAGGAAACGGTAGAACAGAATCGAACAGCAATGACGGTGCGAAGAAGTTGTCATTCTTTGGTAATTCACCGAGGGTGTTTGATCTGGAAGATTTGCTTAGAGCTTCGGCGGAGGTTTTGGGTAAAGGAACGTTTGGAACGGCGTATAAGGCGGTTCTGGAGTCTGGTCCGGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACAATTTCTGAAAAGGAATTCAAGGAGAAGATTGAATTGGTGGGAGCAATGGATCATGAGAAATTGGTCCCTCTCAGAGCTTATTATTTCAGCAGGGATGAAAAACTTCTTGTCTATGATTACATGCCAACGGGAAGCTTATCTGCACTTTTGCACGGAAACAAAGGGGCGGGTAGGACACCATTGAATTGGGAAATCAGATCAGGAATTGCACTAGGAGCGGCTCAGGGCATCGAGTACCTACATTCACAGGGACCTAATGTTTCTCATGGAAACATAAAATCATCCAACATCCTCCTCACAAAATCCTATGATGCCAGAGTGTCTGATTTTGGCCTGGCACATCTTGTTGGCCCTTCCTCCACTCCCAATCGGGTTGCTGGCTACCGTGCGCCGGAAGTTACTGATCCTCGCAAAGTTTCTCAGAAAGCAGATGTCTACAGCTTTGGAGTGTTGCTCTTGGAACTTCTGACTGGAAAGGCTCCCACACATTCTCTCTTAAATGAGGAAGGAGTAGACCTCCCAAGATGGGTTCAATCTGTTGTTAGAGAAGAATGGACTTCTGAAGTGTTTGATCTTGAGCTCCTAAGGTATCAGAATGTTGAGGAGGAGATGGTTCAATTACTGCAGCTTGCAGTAGATTGTGCAGCTCAATATCCTGATAAGCGCCCTTCAATGTCTGAGGTGAGACAACGCATAGAGGAGCTACGTCGCTCAAGCTTGAAAGAGGATCAAGACCAAATTCAGCAGCCTGATCTGATCAATATGATGTAG 1962 0.474 MAPHKLSLLLPIFLILLPLVRPDLASERAALLALRSSVGGRTLLWNVTQQSHCTWAGVQCVRDQVVELHLPGVGLSGKLPNGIFGNLTHLQTLSLRVNALTGSLPSDLASCVHLRNLYLQRNLLSGEIPEFLFSLPDMVRLNLAHNNFSGVIPLEFNKLVRLRTLYLENNQFSGSIPGLNLANLEQFNVSNNLLNGSVPVKLQTFSEDSFLGNSLCGKPLKLCPGEGAAISPSGEIENSNNGGKKKKLSGGAIAGIVIGSVVLLLLIVFALILLCRKKSSKNSRSIDLATMKHPETEIPGDKRVSDVENNNGNGHGNGYSVAAVAAAAMTGNGRTESNSNDGAKKLSFFGNSPRVFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVVAVKRLKDVTISEKEFKEKIELVGAMDHEKLVPLRAYYFSRDEKLLVYDYMPTGSLSALLHGNKGAGRTPLNWEIRSGIALGAAQGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVRQRIEELRRSSLKEDQDQIQQPDLINMM 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1730 653 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Lele06g1730 653 Gene3D Transferase(Phosphotransferase) domain 1 438 651 - -
Lele06g1730 653 FunFam pollen receptor-like kinase 1 332 437 - -
Lele06g1730 653 Pfam Protein kinase domain 366 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1730 653 PANTHER OS05G0588300 PROTEIN 11 636 - -
Lele06g1730 653 ProSiteProfiles Protein kinase domain profile. 363 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1730 653 Pfam Leucine rich repeat 78 124 IPR001611 GO:0005515
Lele06g1730 653 SUPERFAMILY Protein kinase-like (PK-like) 367 633 IPR011009 -
Lele06g1730 653 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Lele06g1730 653 MobiDBLite consensus disorder prediction 634 653 - -
Lele06g1730 653 Gene3D Ribonuclease Inhibitor 138 223 IPR032675 -
Lele06g1730 653 SUPERFAMILY L domain-like 45 202 - -
Lele06g1730 653 FunFam Probable inactive receptor kinase At1g48480 438 641 - -
Lele06g1730 653 Gene3D Phosphorylase Kinase; domain 1 328 437 - -
Lele06g1730 653 FunFam Probable inactive receptor kinase RLK902 24 180 - -
Lele06g1730 653 CDD STKc_IRAK 369 632 - -
Lele06g1730 653 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1730 Lele-ChrLele06 11814664 11817119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1730 23 648 Receptor kinase-like Gene Family AT1G48480 65.204 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele06g1730 Pkinase 5.4e-39 CL0016