Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1727 ATGGCAAGCAGGCAAGACAAGTCAGGCACAAGTAAAAGCAGCTTAGAGAACTTACTGGACTTGGACAAAACAAGAGTCACAAAAAGCATTGTGAAGCAACTGAGACCAAAGAGGTCCATTCCTGAACATGGTCTAGAATTCAAGAAAATATCATATTGTGTCCAGAAGAAGCAGAAGAAGAATGGTGTTTGGATCAAGAAAGAAGCTTATCTTCTTCATGACATATCTGGGCAGGCAAATAGAGGTGAGATCATGGCGATCATCGGACCAAGTGGGGCCGGGAAATCAACATTCCTCGATGCCTTGGCTGGTCAGATTGCACAAGGGAGTCTTGAAGGATCAGTTAGAATGGACGGAAAACCAGTGAGTGCAAGTTACATGAAGATGGTATCATCGTATGTGATGCAAGATGACCAGCTTTTTCCTATGTTGACAGTTCTTGAGACATTCATGTTTGCAGCAGAGGTTAGGCTTCCTCCTACACTCTCCAGGGAGGATAAAAAGAAGAGAGTGCATGAGCTCCTTGATCAGCTCGGCTTGCAGAGTGCAGCACATACGTACATTGGTGACGAAGGGACAATAGGAGTGTCAGGAGGGGAAAGAAAACGAGTATCTATTGGCATAGACATCATTCATAAGCCTGCACTTCTGTTTCTTGACGAACCAACCTCAGGTCTTGATTCTACAAATGCTTACAATGTAGTGGAAAATATTAAACACATAGCTCAAGGTGGTAGTATTATCCTCATGACCATACATCAGCCTTCATTCAGAATTCAAAAGCTCCTGGACCAGATCACAATACTTGCAAGGGGAAGACTGATATACATGGGAAGACCAGATGCATTAACTGCTTATCTTTCCGGTTTTGGAAGAACAATACCAGATGGAGAAAATAGTATTGAGTACATGTTAGATGTTATTAAAGAATATGATGAATCAACAATTGGTTTAGACCCCCTTGTTCGGTTCCAATGCTATGGCCAGAAGCCTGACCAAGCAACCATGACACCAATCCCTAAAACACCAAAGAATCCAAGAACACCTCACAGAAGTAGCACCCCTGCATCTAAATATATCATCAACTTGCTGTCACAAGGGTTCACTCCTGGAACATCAAAGCCTGACTCCAACCAAGGTGATGGTGGTGGTGATGATAATGATGATGATGATGATGAGAGTTTCGATTACTCGCTTGAGAGGAAAAGTGCTCAGACCCCAAGAAATGTGGCGAGTGCTGGTGTACCACGTTTGGCTTCTCAGTTCTACCAAGAGTTCTCAGCCAAGGATTTCTCTGTCTGGCTTTACCATGGTGTGGTAGGAACTCCTAAATGCCCCATATCATGGACTCCGGCGAGAACTCCCGCATGGACTCCAGGGAAAACTCCAGGGTGGACACCCGCAAAAACACCTAATTCAGGGCCAAGAAGTGCTATTTCTAGCCCATATTCTGCATCTTATCAGGACCCTCATGGAGCCAAGACCTCCAATGTAGTTAGCCAATCTATGGACTTCTGTGGACCTTCTTATGAAGAGTTTGAGATTGAAAAAGCTCTTGATGAGCCACATCTAGGATCAAAATATGCAAATCCTTGGCTGCGTGAGGTTGCAGTGCTGTCATGGAGAACTGCACTCAATGTGATTCGAACACCTGAACTCTTCCTGTCCCGTGAGGTTGTTTTAACTGTTATGGCACTTATCCTCTCCACCATCTTCAAAAACCTTGGTCATCTCACTTTCAAAGACATAAGTAGGCTTCTCAACTTCTATATCTTTTCAGTGTGCCTAGTTTTCTTCTCTTCCAACGATGCTGTCCCTACTTTCATCTTAGAAAGGTTCATCTTCATCAGAGAGACATCCCACAATGCTTACCGTGCTTCTTCATACGTCATTTCTTCCCTCATTGTCTATCTCCCATTTTTTGCCGTCCAAGGCTTCACATTTGCCGCCATAACCAAAGTATTCCTTCACCTAAAAAGCAGTCTCTTCCATTTTTGGATGATCCTCTTTGCCTCGCTTATCACTACCAATGCCTATGTGATGCTTGTTAGTGCACTTGTTCCAAGCTACATCACAGGGTATGCAGTAGTTATAGCCACAACTGCTCTCTTCTTCTTAACTTGTGGTTTCTTCCTCAAGAGAACTCAGATACCTTCCTATTGGAAGTGGCTCCATTATATTTCTGCAATCAAATATCCATTTGAGGCATTGCTGACAAATGAATTCAAGAATGACAAATGCTACACAGGGAACCCGGCAGATTTGTCTCCTGGCCCTTTAGGGGAAGTGAAGCTAAGTCCCCACCATAACATCTCCAGTAATTGCTTAATAGGAGAAGATGTTTTGTCCTCAATGGATATCAATAAAGAAGACATATGTTATGACATATTTATCCTGCTGGCTTGGGGCGTTCTTTACAGGTTCTTATTCTATTTGGTTTTGAGATTTTACTCCAAGAATGAAAGAAAATGA 2472 0.4308 MASRQDKSGTSKSSLENLLDLDKTRVTKSIVKQLRPKRSIPEHGLEFKKISYCVQKKQKKNGVWIKKEAYLLHDISGQANRGEIMAIIGPSGAGKSTFLDALAGQIAQGSLEGSVRMDGKPVSASYMKMVSSYVMQDDQLFPMLTVLETFMFAAEVRLPPTLSREDKKKRVHELLDQLGLQSAAHTYIGDEGTIGVSGGERKRVSIGIDIIHKPALLFLDEPTSGLDSTNAYNVVENIKHIAQGGSIILMTIHQPSFRIQKLLDQITILARGRLIYMGRPDALTAYLSGFGRTIPDGENSIEYMLDVIKEYDESTIGLDPLVRFQCYGQKPDQATMTPIPKTPKNPRTPHRSSTPASKYIINLLSQGFTPGTSKPDSNQGDGGGDDNDDDDDESFDYSLERKSAQTPRNVASAGVPRLASQFYQEFSAKDFSVWLYHGVVGTPKCPISWTPARTPAWTPGKTPGWTPAKTPNSGPRSAISSPYSASYQDPHGAKTSNVVSQSMDFCGPSYEEFEIEKALDEPHLGSKYANPWLREVAVLSWRTALNVIRTPELFLSREVVLTVMALILSTIFKNLGHLTFKDISRLLNFYIFSVCLVFFSSNDAVPTFILERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGFTFAAITKVFLHLKSSLFHFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPSYWKWLHYISAIKYPFEALLTNEFKNDKCYTGNPADLSPGPLGEVKLSPHHNISSNCLIGEDVLSSMDINKEDICYDIFILLAWGVLYRFLFYLVLRFYSKNERK 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1727 823 CDD ABCG_EPDR 45 278 - -
Lele06g1727 823 Gene3D - 43 338 IPR027417 -
Lele06g1727 823 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 30 811 - -
Lele06g1727 823 Pfam ABC transporter 72 224 IPR003439 GO:0005524
Lele06g1727 823 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 296 IPR003439 GO:0005524
Lele06g1727 823 Pfam ABC-2 type transporter 536 742 IPR013525 GO:0016020|GO:0140359
Lele06g1727 823 ProSitePatterns ABC transporters family signature. 196 210 IPR017871 GO:0005524|GO:0016887
Lele06g1727 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 287 IPR027417 -
Lele06g1727 823 SMART AAA_5 81 281 IPR003593 -
Lele06g1727 823 MobiDBLite consensus disorder prediction 332 354 - -
Lele06g1727 823 Pfam ABC-2 type transporter 253 309 IPR043926 GO:0140359
Lele06g1727 823 MobiDBLite consensus disorder prediction 465 489 - -
Lele06g1727 823 MobiDBLite consensus disorder prediction 456 489 - -
Lele06g1727 823 MobiDBLite consensus disorder prediction 368 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1727 Lele-ChrLele06 11782396 11785789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1727 42 283 Calmodulin-binding Proteins AT2G36910 23.695 1.57e-10 63.2