Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1709 ATGGTGGGTTATAATGAAGGGACCGAGTTCAACATGCCTGATCATGCATTCAATGGAAGGAAGCTTAGGCCTTTAGTTCCAAGGCCACTGGCTTCACCTATTACACATCATGCTACTGATTTCTTCACACAGTGTCACAATCTGGCATCAGTGACAGATCAAAGCGAGAGAGAGTTCAACAATACTCCACCAGTTGTGGTGAGCACAAGGTGGAATCCTACCCCAGAACAGCTGAGAGCTCTTGAAGAGTTGTATCGGAGAGGAACAAGAACCCCATCTGCAGAACAAATTCAGCATATCACAGCACAGCTTCGAAGGTTTGGGAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCATAAAGCCAGAGAGAGACAGAAAAGACGCCGTCAAGTGGAATCAGCAGCTGCAGTAGTAGCAGAAGGGCACCACTACGATCTTGAAAAGCAAGACTTAGGCGCAAGTAGGACAGCGTTTGAAGTTGAACAGACTAGTAGCAAGAACAACTGGGCACCCTCTACAAACTGCAGTGTTTCTCTTATTGCAGAGGAATCTGTCTCAATACAACAAAGAGCAGCAAAAGCAGCAGCAGCAGCAGTTGTTGCAGAGTGTAGAACAGATGGTTGGGTTCATCAATTCCATGAAGGAGAATTACAACAACAAAGAAGAAATAACTTTATGGAAAGGAATGCCACGTGGCAGATGTTACAGGCTCCTCCCCCTACAGCTGCTGCTACAACTGCTCCCTCTACAACTAGCATTACAGCCACAGTAATGGATCCAACGAAGCTCATCGCAAAGAACCATTGTGATCTCAGCTTTTTCATTTCTCCTCACACTGATGATGATCATGAAAATGGTGGTGGTGAGATCCTCAGGGAAGATATTCATCATAACAACCGTGTGGAATCACAAACACTTCAACTTTTCCCACTACGGAGTGGATCGGGAGATGGCTGCTGCAATAATAATAACATTAATAATAATCAGAAAGAGACTGAGATGTCATCGGTATCCGCCTTGGATTCCAAGTACTTGCCCCCAAGCCACCAGTTCTTTGAGTTCCTTCCATTGAAGAACTAA 1089 0.4454 MVGYNEGTEFNMPDHAFNGRKLRPLVPRPLASPITHHATDFFTQCHNLASVTDQSEREFNNTPPVVVSTRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQVESAAAVVAEGHHYDLEKQDLGASRTAFEVEQTSSKNNWAPSTNCSVSLIAEESVSIQQRAAKAAAAAVVAECRTDGWVHQFHEGELQQQRRNNFMERNATWQMLQAPPPTAAATTAPSTTSITATVMDPTKLIAKNHCDLSFFISPHTDDDHENGGGEILREDIHHNNRVESQTLQLFPLRSGSGDGCCNNNNINNNQKETEMSSVSALDSKYLPPSHQFFEFLPLKN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1709 362 ProSiteProfiles 'Homeobox' domain profile. 74 129 IPR001356 GO:0003677
Lele06g1709 362 FunFam WUSCHEL-related homeobox 4 68 135 - -
Lele06g1709 362 SMART HOX_1 66 133 IPR001356 GO:0003677
Lele06g1709 362 SUPERFAMILY Homeodomain-like 69 133 IPR009057 -
Lele06g1709 362 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 54 357 IPR044555 GO:0003700|GO:0099402
Lele06g1709 362 Pfam Homeodomain 69 128 IPR001356 GO:0003677
Lele06g1709 362 CDD homeodomain 69 130 IPR001356 GO:0003677
Lele06g1709 362 Gene3D - 67 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1709 Lele-ChrLele06 11631543 11633708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1709 2 362 Wox Gene Family AT3G18010 36.725 1.60e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele06g1709 Homeodomain 1.5e-19 CL0123