Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1701 ATGAAGAACATTCTCAAGAAGCTTCATATTATGCCCCATCAATCAGAAGATACTGAAGGGTCTACTTCATCAAAGGGAAACATGTCCAACGATAGTCCATCCCCTAAGAAGCTTTCTCACTCACGTTTGCCTCAAATTCCTCAGAATAAACCCTTTTCAGGGCTTTCGAATTGGTTGCATGCAGTTGCTAATAAGCAGAGTTCTAGTCCTTCATCTTCGAACCTCACAAGAGGAGAGAGAATGGAACCGTCTGATTCAATGAGCAGTGGTGGTCTGGATACTGTTTCTGATTCTGCAAGGTGTGATACAACTCCTAGCACTTCGAAGGATCCTGAAATAGAGGAAGAGTATCAGATTCAATTGGCTCTAGAGTTGAGTGCAAAGGAGGATCCTGAGGCCGTGCAAATTGAAGCTATTAAGCAAATCAGTTTAGGCTCTTGTGACCCTGACAATACACCAGCTGAAGTTGTGGCCTATCGATACTGGAATTACAATGCTCTTGGATATGATGACAAGATCTTAGATGGTTTCTACGACCTTTATGGGATCTTGACTGAGTCAGCCTCTGCAAGAATGCCTTCCCTCGTGGACTTGCAAGGAACATCAATCTCAGATGGGGTCACATGGGAAGCAGTCTTAGTCAATAGGGCTGCTGATTATAATTTGTTAAAACTTGAGCAAAAAGCCCTAGAGCTAGCAAGCAAGACAAGATCAGATATTGAAGTAGTAGTAAATAGCAATTTGGTGAAGAAGATTGCCATATTCGTGGCTGACTATATGGGTGGACCAGTTTCAGATCCTCAACATATGAAAAGTGCATGGCAGAGTCTTGGTTATAGTCTGAAATCTACCCTTGGTAGCATGGTTTTGCCACTTGGTTCTCTGACTATTGGATTGGCTCGGCACCGTGCATTGTTATTTAAGGTTTTAGCTGATTGTGTGGGTGTTCCATGTCGGTTGGTTAAAGGACAGCAATACACAGGTTCTGATGATGTTGCAATGAACTTTATCAGGATTGGTGATGGAAGGGAGTACATTGTTGACCTAATGGCTGATCCTGGAACACTTATCCCAGCTGATGCTACTGGATCGCATATTGTGTATAATGAATCAATATTTTTGGCCATTCCTTCAATAGGAGACCTTGATTCCTCTCATACGGCATTGTCCAGCAGAGGGATCGGAAGTTCAATAGAAGCAACTTCAGGCTCTGGGGCATTGAACGATTCATACAAATCAAAACAGTTTGCATCCGTTGGATCTGACATAAGCAGGCCTGCTCCTGGCAAGGAAGAACCAAAGAGACCCTTGTATACCCTCAATGTCGAGAAGATTGCGCTGGAAACTCCTAGTTTGCCTAATTATACACATGGACATGCAAGATCACCTTCTTGGACAGAAGGGATCAGTTCACCTGCAGTTCATAGAAGGAAGGTTAAGGATGTTTCACAATATATGATTGATGCTGCCAAAGATAATCCTAACTTAGCTCAAAAGCTTCATGATGTTTTACTTGAAAGTGGTGTTGATCCTCCTCCGAACTTATTTTCTGAGATTTATAATGAGCAACTTGGTTCCCCGTCTCAGACTGAAGAAAAAGATGAACTTAAACAGGGGATTGTCCAGCAAGAAACTAAGGTTGCTGATAATCTAGATGCCGTTCAAATTTTGCCTCCTTTGCCTCACTACAGAATTCATTCCAAAGCAAGCACTAGCAGTCAACTGGAGCATTCTAAGCCCGTAGAAGGTTTAGGGACCAACCTTACTCTTGATATAAAGGAAGCAGCTGGTCAGCACATACTGTCACAAGAAGAAGCCAGTCCGGTGAAATATGGAAAAAATGTCCCGGTTGCTGCAGCTGCTGCAGCAGCAGCTGCTGTTGTTGCATCTTCCATGGTAGTTGCTGTGGCAAAGTCAAGCACCGACTCGAGGATTGAGCTTCCTGTAGCAGCTGCTGCAACTGCTACGGCTGCAGCTGTTGTTGCAACCACTGCAGCTGTCAGTAAACAGTATGAACAGGGCAGTCGGAGTGATGGAGATGCAGATGGTGGTTATGAGCCAAAGGGTAGCGGTGATGGAGAGCATGGTACTTTAGGAGAAAATTCAGAATACGAGAGAAGATCTGATAAATCAGTTGGTAATGAAAGCATAAAATCTGATTCTGCACTAGATGATGTTGCAGAGTACGAGATTCCATGGGAAGAAATGGTGCTGGGTGAACGCATTGGACTTGGGTCATACGGGGAGGTGTACCATGGCGAATGGAGAGGAACTGAAGTTGCTGTAAAAAGGTTTCTAGATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTTCAAATAATGAAAAGATTGAGGCACCCAAATGTTGTTCTCTTCATGGGAGCTGTAATTCGACCTCCAAATCTGTCAATTGTTACGGAATTTCTTCCCAGAGGCAGTTTGTATAGATTAATTCACCGTCCTAACAGCCAATTAGATGAGCGAAGGCGATTGAGGCTGGCCCTCGATGCTGCTCGAGGAATGAATTATTTGCACAACTGCTCTCCAATGATAGTCCACCGTGATTTAAAGTCCCCAAATCTTCTCGTTGACAAAAACTGGGTCGTGAAGGTTTGTGATTTTGGGTTATCACGAATGAAGCATAGTACATTCCTCTCTTCCCGATCAACTGCTGGGACTGCGGAGTGGATGGCTCCTGAAGTGTTGCGAAATGAACCTTCAAATGAAAAGTGCGATGTTTATAGCTTTGGAGTCATATTATGGGAGCTCTTGACACTGCAGCAGCCATGGGGAGGGATGAATCCGATGCAAGTTGTTGGTGCAGTGGGTTTCCAACATCGCCGTCTTGACATTCCGGACAACATGGACCCTGTCGTAGCTGATATTATCAGGCAATGCTGGCAGACAGATCCAAAGCTGAGACCCACATTTGCGGAGATCATGGCCGCTCTGAAGCCATTACAGAAGCCGATTGTGAGTTCTCATCATATGGCGAGGTCTGGTGCACAGTTAAGGACAGTTGTAGAAGATGCAGCAGGATAA 3054 0.4424 MKNILKKLHIMPHQSEDTEGSTSSKGNMSNDSPSPKKLSHSRLPQIPQNKPFSGLSNWLHAVANKQSSSPSSSNLTRGERMEPSDSMSSGGLDTVSDSARCDTTPSTSKDPEIEEEYQIQLALELSAKEDPEAVQIEAIKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGILTESASARMPSLVDLQGTSISDGVTWEAVLVNRAADYNLLKLEQKALELASKTRSDIEVVVNSNLVKKIAIFVADYMGGPVSDPQHMKSAWQSLGYSLKSTLGSMVLPLGSLTIGLARHRALLFKVLADCVGVPCRLVKGQQYTGSDDVAMNFIRIGDGREYIVDLMADPGTLIPADATGSHIVYNESIFLAIPSIGDLDSSHTALSSRGIGSSIEATSGSGALNDSYKSKQFASVGSDISRPAPGKEEPKRPLYTLNVEKIALETPSLPNYTHGHARSPSWTEGISSPAVHRRKVKDVSQYMIDAAKDNPNLAQKLHDVLLESGVDPPPNLFSEIYNEQLGSPSQTEEKDELKQGIVQQETKVADNLDAVQILPPLPHYRIHSKASTSSQLEHSKPVEGLGTNLTLDIKEAAGQHILSQEEASPVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSTDSRIELPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDADGGYEPKGSGDGEHGTLGENSEYERRSDKSVGNESIKSDSALDDVAEYEIPWEEMVLGERIGLGSYGEVYHGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVIRPPNLSIVTEFLPRGSLYRLIHRPNSQLDERRRLRLALDAARGMNYLHNCSPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELLTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPVVADIIRQCWQTDPKLRPTFAEIMAALKPLQKPIVSSHHMARSGAQLRTVVEDAAG 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1701 1017 ProSiteProfiles Protein kinase domain profile. 736 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1701 1017 MobiDBLite consensus disorder prediction 15 106 - -
Lele06g1701 1017 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 993 - -
Lele06g1701 1017 Gene3D Phosphorylase Kinase; domain 1 729 813 - -
Lele06g1701 1017 SMART serkin_6 736 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1701 1017 MobiDBLite consensus disorder prediction 670 719 - -
Lele06g1701 1017 CDD STKc_MAP3K-like 742 988 - -
Lele06g1701 1017 Gene3D Transferase(Phosphotransferase) domain 1 815 1000 - -
Lele06g1701 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 855 867 IPR008271 GO:0004672|GO:0006468
Lele06g1701 1017 MobiDBLite consensus disorder prediction 1 114 - -
Lele06g1701 1017 PRINTS Tyrosine kinase catalytic domain signature 896 906 IPR001245 GO:0004672|GO:0006468
Lele06g1701 1017 PRINTS Tyrosine kinase catalytic domain signature 959 981 IPR001245 GO:0004672|GO:0006468
Lele06g1701 1017 PRINTS Tyrosine kinase catalytic domain signature 810 823 IPR001245 GO:0004672|GO:0006468
Lele06g1701 1017 PRINTS Tyrosine kinase catalytic domain signature 915 937 IPR001245 GO:0004672|GO:0006468
Lele06g1701 1017 PRINTS Tyrosine kinase catalytic domain signature 849 867 IPR001245 GO:0004672|GO:0006468
Lele06g1701 1017 FunFam Serine/threonine-protein kinase CTR1 815 998 - -
Lele06g1701 1017 Pfam Protein tyrosine and serine/threonine kinase 737 988 IPR001245 GO:0004672|GO:0006468
Lele06g1701 1017 ProSitePatterns Protein kinases ATP-binding region signature. 742 763 IPR017441 GO:0005524
Lele06g1701 1017 SUPERFAMILY Protein kinase-like (PK-like) 719 987 IPR011009 -
Lele06g1701 1017 FunFam Serine/threonine-protein kinase isoform 1 727 814 - -
Lele06g1701 1017 MobiDBLite consensus disorder prediction 698 714 - -
Lele06g1701 1017 MobiDBLite consensus disorder prediction 675 689 - -
Lele06g1701 1017 Pfam Ethylene-responsive protein kinase Le-CTR1 154 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1701 Lele-ChrLele06 11572099 11584545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1701 1 999 MAP Kinase Kinase Kinase AT1G73660 63.350 0.0 1151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele06g1701 PK_Tyr_Ser-Thr 6.9e-67 CL0016