Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1699 ATGTTCAGATGGAAGAAGTCCCTCTGTCCTGATAGGAAAGGGAGTTTTACTGTAGAAGAAGATGAGCGCTTGATAGTGGCTGTCCATCTCTTTGGACGGAAATGGAATCAGATAGCTAGATTTGTTCCAGGCCGCACCCAAGCTCAGTGTAGAGACAGGTACGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGATGGACTAAGGAAGAAGATTCGGGATTGAAAAAAGCAATTGCCAAACATGGATTCTGCTGGTCAAAGGTTGCTGCAGATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTTCTATTTCCTGACCAAGTTCCCATGCTTCAAGCAGCTAGAAAGATGAAAAAATCTGCTCTGATCAGTAACTTTGTTGATCGGGAGTCTGAACGGCCTTGCCTTTCTTTAAACGATTTTCTTCCTTTGGCACTGTTAGATCCACCATCCGATCCAGATGCTGTGAACCTCCCTCAGAAGCGGAAGAGTATGTCAAGCAATACTTCTGAGAAAAAGAGGCCCAAAAAACGCACAAAAAAGGCTCAAAGTTGTCTCAAGAAAGCAGAGGCTGACAAGGTTGAGCCTTGTAGTGGACATGGTGCCCACGAGCTGAAGATTACTGAACCACATTTGGAGGATAACTCAGTTGAAACAGTGCATGATCATTCCCCACTGGACTTGGTTGTGAAAACAACGAATGGCCAAGGGGATTTAGGTGGACATAATAATATCGATAAGCTAATTGAGTCAAATCAAATGTGGGGGGGTTTTAATGAATTACATGAAGTGAGCCATCCTTGTATAACACCTTGTGAGAATCCAGAAGCAGGGACAACAGACGGGCATTGTGAGAAAATCTCTTCCATGGACTCATTGAAATGCCAAACTGGAAGAAAGTCAACCCTATCTGCAAGTATATCTGATAGTGCAGTTGTAGGTAGCGAGGTTGCTGGAAATACTACTTCAAAGAAGGAAAGAAAGAAGAAAGGGAAACACAACAGAATGGTTAGAAGTGTTCAAACAGCGGAGGACCACCTGGTTAAGAATAAAATGTCAAAACCTGGAAACCTATCTTCTATACAGATTTTAGAAAGTCAGGATGAAGACAATATAACTCTTGCTAGATTTGTACGCAATGCGTCGAACAAACGTGTTAAAAATACAGATCAAATGATTCAGGCTGTTTCCTTTGCTAGTTGCTCTATAAAAAAATCACAGAGATCTCGTCGAGCAGCCAGACAAACTCATGATTACCTGCCCTTTAGTTTGAAAAGGGGACATGGATCGCTTTCTGAAGAAGTGCACAACGGTCATGACAGCAACCCAGAAACGTTGGTCATGCAAGACAAGTTAAATAAAGATTGTATTGATGTTACACCTTCGACGCTGTTGCTCCAGAATCATCCTTGCAATTTGAAGAACATGTCAACCAGTGAAGCTGATGTCAAAGGGAAGGCAATGTCAGGGCCATTTGATGAGCAGACTGTGTTTTTGGATGATGTGACAGAACCCAAAAACATCGATGTTGGAGAGGATGTGCCTACTGACGTGACCCTTGCTTCCTTCCTGAAGAAGAAAAGAAAGGGCAAGACTGGCAGAGCCAGTGATGCTGAAGAGGTTAGCGACCACCGAGGTTCTCCGTCAGACCACCACAGAGCCCGAAATGCCACCACAAAACGTGGTTTCATACAGAAGCTCCAAGTTCCATCATTTCAGCAGATGAACACAAGATAA 1752 0.4378 MFRWKKSLCPDRKGSFTVEEDERLIVAVHLFGRKWNQIARFVPGRTQAQCRDRYVNSLDPSLKWGGWTKEEDSGLKKAIAKHGFCWSKVAADVPPRTDSQCRKRWRVLFPDQVPMLQAARKMKKSALISNFVDRESERPCLSLNDFLPLALLDPPSDPDAVNLPQKRKSMSSNTSEKKRPKKRTKKAQSCLKKAEADKVEPCSGHGAHELKITEPHLEDNSVETVHDHSPLDLVVKTTNGQGDLGGHNNIDKLIESNQMWGGFNELHEVSHPCITPCENPEAGTTDGHCEKISSMDSLKCQTGRKSTLSASISDSAVVGSEVAGNTTSKKERKKKGKHNRMVRSVQTAEDHLVKNKMSKPGNLSSIQILESQDEDNITLARFVRNASNKRVKNTDQMIQAVSFASCSIKKSQRSRRAARQTHDYLPFSLKRGHGSLSEEVHNGHDSNPETLVMQDKLNKDCIDVTPSTLLLQNHPCNLKNMSTSEADVKGKAMSGPFDEQTVFLDDVTEPKNIDVGEDVPTDVTLASFLKKKRKGKTGRASDAEEVSDHRGSPSDHHRARNATTKRGFIQKLQVPSFQQMNTR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1699 583 MobiDBLite consensus disorder prediction 156 194 - -
Lele06g1699 583 MobiDBLite consensus disorder prediction 537 562 - -
Lele06g1699 583 SUPERFAMILY Homeodomain-like 38 112 IPR009057 -
Lele06g1699 583 CDD SANT 67 109 IPR001005 -
Lele06g1699 583 ProSiteProfiles SANT domain profile. 11 56 IPR017884 -
Lele06g1699 583 Gene3D - 6 62 - -
Lele06g1699 583 Gene3D - 63 111 - -
Lele06g1699 583 Pfam Myb-like DNA-binding domain 16 75 - -
Lele06g1699 583 CDD SANT 15 58 IPR001005 -
Lele06g1699 583 SUPERFAMILY Homeodomain-like 3 54 IPR009057 -
Lele06g1699 583 ProSiteProfiles Myb-like domain profile. 12 58 IPR001005 -
Lele06g1699 583 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Lele06g1699 583 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 53 IPR017930 -
Lele06g1699 583 MobiDBLite consensus disorder prediction 566 583 - -
Lele06g1699 583 MobiDBLite consensus disorder prediction 531 583 - -
Lele06g1699 583 SMART sant 63 111 IPR001005 -
Lele06g1699 583 SMART sant 12 60 IPR001005 -
Lele06g1699 583 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Lele06g1699 583 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 2 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1699 Lele-ChrLele06 11518365 11522158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1699 3 190 MYB-Related Transcription Factor Family AT3G18100 50.794 2.92e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g1699 Myb_DNA-bind_6 1.3e-14 CL0123