Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1687 ATGGATATTGAGGAGGACATCCGTTCTCTACAGCTTGATTCTGCAGATTTAACAGAAGACCATAATGGTGTTGTTAATCCGGAGGATGCAAAGCCTGAAGAAGTTGAGAATTCCGCTGAGATGGATGAAGTTGCAGGTTTAAACAAGGAAGTTAAGGCAAAGCCTGTAAAGGCTGAGTCTAAAGATAAGGAAATTCCTTCAGTGGAAGATCAAGGGGATGTGACGACAGATAGGAAAAGACACTTGAATGTCGTGTTCATTGGTCATGTTGATGCTGGTAAGTCTACAACGGGAGGCCAGATTCTTTTCCTAAGTGGTCAGGTTGATGAACGTACTATCCAAAAATATGAAAAGGAAGCAAAGGACAAAAGCAGAGAAAGTTGGTATATGGCTTATATAATGGACACTAATGAAGAGGAGAGGGTAAAGGGCAAAACGGTTGAAGTTGGAAGAGCGCATTTTGAGACAGAAAAAACAAGATTTACAATTTTGGATGCACCTGGTCACAAAAGCTATGTCCCCAACATGATCAGTGGTGCGTCTCAAGCTGATATTGGAGTTTTGGTTATTTCTGCTCGAAAGGGAGAATTCGAAACTGGATATGAGAGAGGCGGACAAACCCGTGAACATGTCCAGCTTGCAAAGACATTGGGTGTGTCTAAGCTAGTTGTTGTTGTTAATAAAATGGACGAGCCTACAGTGAAGTGGGCAAAAGAAAGGTATGATGAAATTGAGTCAAAGATGATTCCTTTTCTTAAGTCATCGGGCTACAATGTGAAGAAAGATGTACTGTTTTTACCAATGTCTGGGCTGACTGGTGCAAACATCAAAACAAGAGTGGATAAAAGCACTTGTCCTTGGTGGGATGGTCCCTGCCTATTTGAAGTCCTTGATAGTGTTGAAATTCCACCTCGTGACCCCAAAGGCCCTTTCAGGTTGCCCATAATTGACAAATTCAAAGACATGGGAACTGTTGTGATGGGAAAAGTAGAATCTGGTACTGTCCATGAAGGGGATTCCTTGTTGGTTATGCCAAATAAGGATCATGTAAAAGTAGTTGCTGTGTTGATTGATGAAGATAGGGTCAAACGTGCAGGACCTGGTGAGAATTTACGGGTTAGAATATCTGGTGTTGAAGAAGAGGACATATTAAGCGGGTTTGTTCTGTCTAGTGTTGAAAATCCAATACCAGCTGTTACTGAGTTTGTGGCTCAGCTTCAGATCCTTGAATTGCTGGACAACGCTATTTTTACTGCTGGGTACAAGGCTGTTTTGCATATCCACAGTGTTGTTGAAGAATGTGAGATTGTTGAGCTGCTTCAGCAAATTGATCCAAAGACAAAGAAACCTATGAAAAAGAAGCCTCTCTTTGTGAAGAATAATGCTGTTGTTGTCTGCCGAGTTCAGGTTAATAATATGATATGCATTGAGAAATTCTCTGATTTCCCACAACTTGGGAGGTTCACTCTTCGCACTGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGTTTTGAATTTTGA 1524 0.414 MDIEEDIRSLQLDSADLTEDHNGVVNPEDAKPEEVENSAEMDEVAGLNKEVKAKPVKAESKDKEIPSVEDQGDVTTDRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLVVVVNKMDEPTVKWAKERYDEIESKMIPFLKSSGYNVKKDVLFLPMSGLTGANIKTRVDKSTCPWWDGPCLFEVLDSVEIPPRDPKGPFRLPIIDKFKDMGTVVMGKVESGTVHEGDSLLVMPNKDHVKVVAVLIDEDRVKRAGPGENLRVRISGVEEEDILSGFVLSSVENPIPAVTEFVAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKPLFVKNNAVVVCRVQVNNMICIEKFSDFPQLGRFTLRTEGKTVAVGKVTGFEF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1687 507 MobiDBLite consensus disorder prediction 22 74 - -
Lele06g1687 507 CDD eRF3_II 310 391 - -
Lele06g1687 507 CDD EF1_alpha 83 304 - -
Lele06g1687 507 Pfam Elongation factor Tu C-terminal domain 396 503 IPR004160 -
Lele06g1687 507 Gene3D Translation factors 308 393 - -
Lele06g1687 507 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 79 308 IPR000795 GO:0003924|GO:0005525
Lele06g1687 507 PRINTS GTP-binding elongation factor signature 162 172 IPR000795 GO:0003924|GO:0005525
Lele06g1687 507 PRINTS GTP-binding elongation factor signature 178 189 IPR000795 GO:0003924|GO:0005525
Lele06g1687 507 PRINTS GTP-binding elongation factor signature 83 96 IPR000795 GO:0003924|GO:0005525
Lele06g1687 507 PRINTS GTP-binding elongation factor signature 222 231 IPR000795 GO:0003924|GO:0005525
Lele06g1687 507 Gene3D - 60 303 IPR027417 -
Lele06g1687 507 Pfam Elongation factor Tu domain 2 323 389 IPR004161 GO:0005525
Lele06g1687 507 CDD eRF3_C_III 397 503 - -
Lele06g1687 507 PRINTS Yeast eukaryotic release factor signature 306 317 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele06g1687 507 PRINTS Yeast eukaryotic release factor signature 185 192 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele06g1687 507 PRINTS Yeast eukaryotic release factor signature 220 227 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele06g1687 507 PRINTS Yeast eukaryotic release factor signature 447 456 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele06g1687 507 MobiDBLite consensus disorder prediction 1 15 - -
Lele06g1687 507 MobiDBLite consensus disorder prediction 1 74 - -
Lele06g1687 507 Gene3D Translation factors 398 505 - -
Lele06g1687 507 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 135 150 IPR031157 -
Lele06g1687 507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 314 IPR027417 -
Lele06g1687 507 SUPERFAMILY Translation proteins 302 395 IPR009000 -
Lele06g1687 507 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 57 303 - -
Lele06g1687 507 Pfam Elongation factor Tu GTP binding domain 79 285 IPR000795 GO:0003924|GO:0005525
Lele06g1687 507 FunFam Putative translation elongation/initiation factor family protein 397 506 - -
Lele06g1687 507 PANTHER TRANSLATION FACTOR 69 504 - -
Lele06g1687 507 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 307 393 - -
Lele06g1687 507 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 399 504 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1687 Lele-ChrLele06 11397403 11407648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1687 79 500 Eukaryotic Initiation Factors Gene Family AT5G60390 37.882 3.24e-96 297