Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1649 ATGCTGAAACTCGCGTGCCTTTTCCTTCCTCTGTTTTCCTTCTTCATCCATATTGCCTCTGCTAGCAATTCCACTTCATCTTCCACAATCTGTCCCACCTACAGCTGTGACGATGGGCTCCAAATCAGATACCCTTTCTGGCTCTTACGTGGTTCCCCTCCTGACCAGAACTGTGGTTACCAAGAATTCGGCCTCCTCTGCGGTGATAGCTACCCCATCTTCTCAATACATGGGTTATATTATTATGTCACAAACATAGACTATGATAATCATACCCTTCACCTCGTTGATTATGATACTTTCAACCGAACATGTCCAAGGGCACTTCACAGTGTTCCATTGGGCAACTTACCCCTTTCTCACTCCCCTTTGAATTTGAACCTTAGCTTTTATTACAATTGCAGTTCTCACCCCTCTGGTGTGTCGCCCATAAGGTGTTTGACATCTGGTGTGAATGAGTCCTTTGTGTTTGTGATGGGGAACGAGAGTACTTCTGGGGGTTTTGATTGGTCCAAGACTTGTGAAGAGAGTGTTGTGGTGACAGTGAGGAAGGATCGGACTACAAGTGAAGGGTTGATGAATGAGTATAAAGAGGCCATGAATGTAGGGTTTGTTCTTGATTGGCAAACTGCTGAGAGTTGTGAGGAGTGTGAAGCTTCTGATGGGATTTGTGGTTACAGTAATACCAGAAAGGAGTCCTTGTGCTTCTGCAAGGATGGCAACGTACAAAGCAATAGCTGCTCAGGGAGACGCAAGGTCCTTTTGTCAAAGCTAATTATTGGTTTAATAGCTGCAGGAGTGGGAGCTCTTCTTATATGCATCACTATCTTCTTCTCAAGACAAAAAATATCATCATTAATGATCTCAGCAGATTTTTGGAAGATGAAAAAGAACGATGAAGGCGTTGAGTCCTTCATAAGAAATAATGGGCCTCTAACTATAAAAAGATATACATTTTCAGAAATCAAGAAAATGACCAACTCTTTTGAAGTGAAATTGGGAGAAGGAGGTTATGGTAATGTATACAGAGGAAGTATAGACAACAGCTGTCCTGTGGCTGTGAAGGTATTGAAAGCATCCGACGGGAAGGGCGAAGAGTTTATCAATGAGGTTCTGAGCATTAGTAGGACTTCGCATGTAAATATCGTCACCCTCCTTGGTTTTTGTCTTGAAGGAAGCAAAAGGGCACTTGTATATGAACTTATGCCCAACGGTTCACTTGAAAAGTTCATAAGCAAGAGGGTTTTGGAGCCAAATTATCCACCTTTGAGTTGGGAAAAATTACTCCAAATTGCTGAAGGGATAGCCAAAGGACTTGAGTATTTGCATGGTGGCTGCAACACTCGAATCGTGCATTTTGACATAAAACCTACCAATATCCTATTGGACAAAAACTTTTGCCCAAAGATCTCAGATTTTGGGCTAGCTAAACTTTGTTCTAAAACACATAGTATTGTCTCAATGCTTGGTACAAGAGGAACTGTTGGTTATATTGCTCCAGAAGTGTGGAATAGGAACTTTGGAGGAGTCTCCCACAAGTCAGATGTGTACAGCTATGGAATGTTGATTTTGGAAATAGTTGGAGGAAGACAAGATATCAATAGAGAAATGAGTGATTCAAGTGATACATATTTGCCTCATTTGGTATACAAGCAAATTGAGTTAGACAAGAATATAACAGAACATGATGAAGATATGAGCAGAGAGGAAAGTGAAATTGCAAAGAAGATGATGGTGGTGGGACTATGGTGCATTCAGCCCATGCCATCAGATAGGCCTCCCATGAATAGAGTGATTGAGATGTTGGAAGGGAGCTTGGATCAACTGTCAATACCACGAAAGCCCTTCATATTTCCACCTACAATTCCAACAACTGGAGAGGAAAATTTTGCTACAAATGGCGTTCTTTCATTTTCTGCCGATTACCAATGTGGTAGATAG 1941 0.4168 MLKLACLFLPLFSFFIHIASASNSTSSSTICPTYSCDDGLQIRYPFWLLRGSPPDQNCGYQEFGLLCGDSYPIFSIHGLYYYVTNIDYDNHTLHLVDYDTFNRTCPRALHSVPLGNLPLSHSPLNLNLSFYYNCSSHPSGVSPIRCLTSGVNESFVFVMGNESTSGGFDWSKTCEESVVVTVRKDRTTSEGLMNEYKEAMNVGFVLDWQTAESCEECEASDGICGYSNTRKESLCFCKDGNVQSNSCSGRRKVLLSKLIIGLIAAGVGALLICITIFFSRQKISSLMISADFWKMKKNDEGVESFIRNNGPLTIKRYTFSEIKKMTNSFEVKLGEGGYGNVYRGSIDNSCPVAVKVLKASDGKGEEFINEVLSISRTSHVNIVTLLGFCLEGSKRALVYELMPNGSLEKFISKRVLEPNYPPLSWEKLLQIAEGIAKGLEYLHGGCNTRIVHFDIKPTNILLDKNFCPKISDFGLAKLCSKTHSIVSMLGTRGTVGYIAPEVWNRNFGGVSHKSDVYSYGMLILEIVGGRQDINREMSDSSDTYLPHLVYKQIELDKNITEHDEDMSREESEIAKKMMVVGLWCIQPMPSDRPPMNRVIEMLEGSLDQLSIPRKPFIFPPTIPTTGEENFATNGVLSFSADYQCGR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1649 646 Gene3D Phosphorylase Kinase; domain 1 304 401 - -
Lele06g1649 646 Gene3D Transferase(Phosphotransferase) domain 1 402 612 - -
Lele06g1649 646 FunFam PR5-like receptor kinase 402 614 - -
Lele06g1649 646 Pfam Wall-associated receptor kinase C-terminal 149 240 IPR032872 -
Lele06g1649 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Lele06g1649 646 SUPERFAMILY Protein kinase-like (PK-like) 307 603 IPR011009 -
Lele06g1649 646 PANTHER RUST RESISTANCE KINASE LR10-RELATED 299 622 IPR045874 GO:0004672
Lele06g1649 646 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Lele06g1649 646 ProSiteProfiles Protein kinase domain profile. 327 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1649 646 Pfam Wall-associated receptor kinase galacturonan-binding 31 97 IPR025287 GO:0030247
Lele06g1649 646 Pfam Protein tyrosine and serine/threonine kinase 330 602 IPR001245 GO:0004672|GO:0006468
Lele06g1649 646 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1649 Lele-ChrLele06 11073810 11076467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1649 32 629 Receptor kinase-like Gene Family AT5G38260 40.419 3.55e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele06g1649 PK_Tyr_Ser-Thr 2.2e-46 CL0016