Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1641 ATGGCGACGCCGTTGGCTGGACGACAGCACTTGGACGGAGGTGGAGGAGTGGCCGTGCTCTCCAATTCTGTGAACAAGGCAGATTCTTCCTCCTCCACATCCAATGGTGGCTTGAAGTGCTCCGAATTGGAGTCGCCTATTCTAATTTTCTTATTCTTCCACAAAGCGATGCGGAATGAGCTCGATGCCCTCCACCGATTAGCAATGGCATTTGCCACCGGTAATCGCTCTGATATTCAGCCGCTGTGCGAACGCTATCATTTCCTCAGATCAATTTACAGGCACCATTCCATTGCCGAAGATGAGGTGATTTTTCCAGCTCTTGATATACGTGTGAAAAATGTAGCACAGACATATTCCCTCGAACACAAGGGTGAAAGTAATCTTTTTGATCATCTATTTGACCTGTTAAATTCTACCACCCATAATAATGAAAGTTTCTTGAGGGAGTTAGCATTCTGTACGGGAGCCCTGGAGACATCAGTTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTGTTTCCTCTTCTCATTGAAAAGTTCTCTCTTGAGGAACAGGCATCTTTAATTTGGCAGTTTCTATGCAGTATTCCTGTGAATATGATGGCAGTATTTCTTCCATGGCTTTCAGCATCTATATCGCCTGATGAATCTCAGGATCTGCGGAAGTGCTTAGGCAAAATAGTGCCACAAGAAAAGCTTCTTCAGAAGGTTATTTTTACTTGGATGGAAGGGAGAAGTGGTGCCCTCACAGTCGAAAATTGTGTTGATCATTCACAGTTTCAAGGTTCATGTTGCCCGTTAACCCACCAGATTGAGAAAGTAAACTGTGCGTGTGAGTTCACAACAACTGGGAAAAGGAAATATTCTGAGTCTGGTCTGGATGCTTCTGATATTAGCGGAACACATCCTATAGATGAAATATTACTGTGGCATAATGCAATAAAAAAAGAGTTAAGCGAGATAGTGGCAGAGACCAGGAAGATACAGCTCTCTGGAGATTTTACTAATCTATCAGCTTTTAATGAAAGATTGCAATTTATCTCTGAAGTTTGCACATTTCACAGTATTGCTGAGGACAGGGTTATATTCCCAGCTGTAGATGGTGAATTTTCTTTCTTCCAGGAGCATGCCGAAGAAGAAAGCCAATTTAATGACTTTCGGAGTTTGATTGAAGCTATTCAGAATGAAGAAGCAACATCTAATTCACAAGTTGAATTTTATTCCAAGTTGTGCTCACATGCTGATCAGATAATGGAAACTATACAAAGACATTTCCATAATGAAGAAGTTCAAGTTCTTCCACTTGCTCGGAAGCACTTTAGCTTTGGAAGGCAACGTGAACTTCTATATAAAAGTTTGTGCAGGATGCCTTTGAAATTGATTGAACGTGTCCTGCCATGGCTGGTAGGATCGTTAACCGAAGATCAAGTGAAGATGCTTTTAAAAAATATGCAATTGGCAGCCCCAGCAACAGATTCTGCTCTAGTTACACTCTTCTGCGGTTGGGCTTGCAAGGCTTGTAATGAGGGGTTCTGTTTGTCTTCAAGTGCATTGGGTTGCTGTCCTGCTCAAAGACTTACTGATATTGAAGAAAATTTTTTCCAGTCATCCTGTCCTTGTGGCACTTCAGCATCATCTGATAGAGATTACTCATTGCTAATTGAGCTAGATGAGAACAAAAGACCAGTTAAGCGGAGCATATTGGAGTTATGCAAGAACAGAGATGTCTTTGAAACTTCAGAGTCTGAAAGTATTGAGAAACAATGTTGTGGTGCAAGGTCTTGTTGTGTGCCAGGTTTAGGAGTAAACAGTAATAATTTGGGGCAAAGCTCTCTTTCTACTATCAAGTCCTTACGCTCCTTGTCTTTCAGCTCTTCTGCTCCATCTATAAATTCCAGTCTTTTCGTATGGGAAACAGATAATAACTCGTGTGACAACTCTGTAGAAAGACCCATTGATACTATATTTAAATTTCACAAAGCTATACAGAAAGATTTGGAGTATTTAGATATTGAATCTGGAAAGCTTAGTCATGGTGACGAGACAATTCTTCGGCAATTTACTGGAAGATTTCGTCTTTTGTGGGGTCTATATAGAGCTCACAGTAATGCTGAGGATGATATAGTATTTCCAGCACTGGAATCCAAAGAATCCCTTCATAATGTGAGTCATTCATACATGCTGGACCATAAGCAGGAAGAAAAATTATTTGAAGATATTTCCCGTGTTCTTTCTGAGCTTTCTGTCCTTCATGAAGACTTTCAGATGACCAGTATGTTTAATGAAAGTAATTCTGAAACTTCTGATGTTAGTTTCAGAGATAACATAAAGTACAATGAGCTAGCAACTAAACTTCAAGGGATGTGCAAATCCATAAGAGTGACACTGGATCAGCATATTTTTAGGGAAGAGCTTGAGCTCTGGCCATTGTTTGGGAGACATTTTACTGTGGAAGAACAAGACAAGATAGTGGGCCGGATAATTGGGACTACAGGTGCAGAAGTTCTACAATCAATGCTACCATGGGTAACTTCTGCACTTTCTGAGGATGAACAGAACAAAATGATGGATGCATGGAAACAGGCAACAAAAAATACTATGTTCAATGAATGGCTTAATGACTGCAGGAAAGAAAATCCAGCAGCTATATTGCAGAAAGAAACACCAGAGCAAACTTCTCAAATAGGTACTGAACATCAGGAAAGAGTGGACCTGAATGATCAGATGTTTAAGCCAGGATGGAAAGACATATTCCGGATGAATCAGAATGAGCTTGAGTCAGAGATCCGGAAGGTTTATCAAGACTCAACTCTTGATCCTAGAAGAAAAGCATATCTCGTGCAGAATCTAATGACTAGTCGATGGATAGCTGCACAGCAGAAGTTACGTAAAGCTACAGATGGGGATTCTAAAGATGGAGAAAGAATTGAAGGACGCTCAGCATCATTTCAGGACCAGGAGAAACAGATATTCGGGTGTGAACACTATAAAAGAAACTGCAAACTTAGAGCTGCTTGCTGCGGCAAGTTGTTTACATGTAGATTTTGCCATGACAATGTGAGCGATCACTCAATGGATAGAAAAGCAACTTCAGAAATGATGTGTATGCGTTGCTTGAATATACAGCCAGTTGGGCCGATATGCATGACACCTTCATGTTATGGATTTTCAATGGCAAAATACTATTGCAATATATGCAAATTTTTTGATGATGAAAGGAATGTATATCACTGCCCATTTTGCAATTTGTGCCGTGTGGGGAGAGGGCTTGGGATTGATTATTTTCATTGTATGAAATGCAACTGCTGCTTGGGGATAAAATCAGCATCTCACAAGTGCCTGGAGAAAGGCTTAGAAATGAATTGCCCAATATGCTGTGACTTCTTATTTACATCAAGTGCTATAGTCAGAGCTCTACCTTGTGGCCATTATATGCATTCAGCTTGCTTTCAGGCATACACTTGTAGTCACTACACATGTCCAATCTGCAGCAAATCATTGGGTGATATGGCGGTTTACTTTGGCATGCTTGATGCTTTATTGGCTGCAGAGGAGCTCCCAGAAGAGTACAGGGACCGTTATCAGGATATACTCTGCAATGACTGCGAACGAAAGGGGTGTTCTCCCTTCCATTGGTTGTATCACAAATGTGAATTTTGTGGCTCGTACAATAACCGCGTGATCAAGTCGGAGCCATCAAATTCGCGCTGCTCTTAG 3720 0.411 MATPLAGRQHLDGGGGVAVLSNSVNKADSSSSTSNGGLKCSELESPILIFLFFHKAMRNELDALHRLAMAFATGNRSDIQPLCERYHFLRSIYRHHSIAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFDLLNSTTHNNESFLRELAFCTGALETSVSQHMAKEEEQVFPLLIEKFSLEEQASLIWQFLCSIPVNMMAVFLPWLSASISPDESQDLRKCLGKIVPQEKLLQKVIFTWMEGRSGALTVENCVDHSQFQGSCCPLTHQIEKVNCACEFTTTGKRKYSESGLDASDISGTHPIDEILLWHNAIKKELSEIVAETRKIQLSGDFTNLSAFNERLQFISEVCTFHSIAEDRVIFPAVDGEFSFFQEHAEEESQFNDFRSLIEAIQNEEATSNSQVEFYSKLCSHADQIMETIQRHFHNEEVQVLPLARKHFSFGRQRELLYKSLCRMPLKLIERVLPWLVGSLTEDQVKMLLKNMQLAAPATDSALVTLFCGWACKACNEGFCLSSSALGCCPAQRLTDIEENFFQSSCPCGTSASSDRDYSLLIELDENKRPVKRSILELCKNRDVFETSESESIEKQCCGARSCCVPGLGVNSNNLGQSSLSTIKSLRSLSFSSSAPSINSSLFVWETDNNSCDNSVERPIDTIFKFHKAIQKDLEYLDIESGKLSHGDETILRQFTGRFRLLWGLYRAHSNAEDDIVFPALESKESLHNVSHSYMLDHKQEEKLFEDISRVLSELSVLHEDFQMTSMFNESNSETSDVSFRDNIKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALSEDEQNKMMDAWKQATKNTMFNEWLNDCRKENPAAILQKETPEQTSQIGTEHQERVDLNDQMFKPGWKDIFRMNQNELESEIRKVYQDSTLDPRRKAYLVQNLMTSRWIAAQQKLRKATDGDSKDGERIEGRSASFQDQEKQIFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMRCLNIQPVGPICMTPSCYGFSMAKYYCNICKFFDDERNVYHCPFCNLCRVGRGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDFLFTSSAIVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRYQDILCNDCERKGCSPFHWLYHKCEFCGSYNNRVIKSEPSNSRCS 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1641 1239 Gene3D nmb1532 protein domain like 44 194 - -
Lele06g1641 1239 Gene3D nmb1532 protein domain like 306 453 - -
Lele06g1641 1239 ProSiteProfiles Zinc finger RING-type profile. 1123 1165 IPR001841 -
Lele06g1641 1239 CDD Hr-like 654 810 - -
Lele06g1641 1239 FunFam Zinc finger protein BRUTUS 647 875 - -
Lele06g1641 1239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1119 1167 IPR013083 -
Lele06g1641 1239 Pfam CHY zinc finger 994 1069 IPR008913 GO:0008270
Lele06g1641 1239 Gene3D - 1194 1234 - -
Lele06g1641 1239 SUPERFAMILY CHY zinc finger-like 987 1050 IPR037274 GO:0008270
Lele06g1641 1239 Pfam Ring finger domain 1122 1164 IPR001841 -
Lele06g1641 1239 Pfam Zinc-ribbon 1170 1226 IPR039512 -
Lele06g1641 1239 SUPERFAMILY RING/U-box 1120 1175 - -
Lele06g1641 1239 Pfam Hemerythrin HHE cation binding domain 51 177 IPR012312 -
Lele06g1641 1239 Pfam Hemerythrin HHE cation binding domain 303 437 IPR012312 -
Lele06g1641 1239 Pfam Hemerythrin HHE cation binding domain 652 811 IPR012312 -
Lele06g1641 1239 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 695 1234 - -
Lele06g1641 1239 CDD Hr-like 306 435 - -
Lele06g1641 1239 CDD Hr-like 49 175 - -
Lele06g1641 1239 SMART ring_2 1123 1164 IPR001841 -
Lele06g1641 1239 ProSiteProfiles Zinc finger CHY-type profile. 987 1056 IPR008913 GO:0008270
Lele06g1641 1239 ProSiteProfiles Zinc finger CTCHY-type profile. 1059 1122 IPR017921 -
Lele06g1641 1239 SUPERFAMILY Zinc hairpin stack 1060 1116 IPR037275 -
Lele06g1641 1239 FunFam Zinc finger protein-related isoform 1 1118 1167 - -
Lele06g1641 1239 Gene3D nmb1532 protein domain like 646 882 - -
Lele06g1641 1239 CDD RING-H2_Pirh2 1122 1165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1641 Lele-ChrLele06 11013161 11021291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1641 1 1239 C2H2 Transcription Factor Family AT3G18290 66.508 0.0 1670