Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1628 ATGGAGGAGAAGAATAATAATCTACCTCCTGGATTCAGATTCCATCCCACAGATGAAGAGCTCATAAACTATTATCTAACGAGTAAAGTTTCTGATGCTAATGGCTTCACTTGCAAAGCTATAGCAGTGGTTGATCTCAACAAGTCTGAACCTTGGGACCTTCCTGCTAAGGCTTCCATGGGAGACAAGGTATGGTACTTCTTCAGTTTAAGAGATCGGAAATATCCAACCGGACTCCGAACCAACCGGGCCACAGAATCAGGCTACTGGAAAACCACCGGAAAAGACAAACACATCTTTCACGGCGGAGCGTTGGTCGGCTTCAAGAAAACCCTCGTCTTCTACCAAGGAAGAGCTCCTCGTGGTCTCAAATCTAATTGGGTTATGCATGAATATCGCCTCCACAATATGCCCCATTTTGCACCTTCCAAGGAAGAATGGGTTGTTTGCAGGGTGCTCCAAAAGAGCACATCAACAGCTAAAAAACATCAGGAGATGACATCACCGTCCCAAGTATCTCTTGATTCACCTTGTGATGCAACGAGCTCAATGGTGAACGAACTTGCTAATTTTACTAGTCTTACAAATTCCTCAGCAGGATTCATGAACAACAACATTATACCACCAACTAATAACAACATTAATATTGGCGATCACAGTGATGTAAACACAAACATGAACTTGAGCAGAAATTGGTTATCATCATCAGCGGCAGCAGAGCAAGTTCCTTCTCTTGTCCCATGGCCTGCATCAGCTTCTCGAGGGTTAATGCTTAATCCCAATCTGTCAGTGAACTCATTGCTTCTCAAAGCATTGCAGCTCAAGAACATTAATGATCCCTTTGTTGCATCATCCTACATGTCTCAAGCAGCAATTTCCAACAACCTTGGAGGAACTCATGATCATGTCAGTGCTTCTCCTCAGTCGGATCAACCGTTCAATCTGGACTCCGTTTGGTGA 960 0.4396 MEEKNNNLPPGFRFHPTDEELINYYLTSKVSDANGFTCKAIAVVDLNKSEPWDLPAKASMGDKVWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKHIFHGGALVGFKKTLVFYQGRAPRGLKSNWVMHEYRLHNMPHFAPSKEEWVVCRVLQKSTSTAKKHQEMTSPSQVSLDSPCDATSSMVNELANFTSLTNSSAGFMNNNIIPPTNNNINIGDHSDVNTNMNLSRNWLSSSAAAEQVPSLVPWPASASRGLMLNPNLSVNSLLLKALQLKNINDPFVASSYMSQAAISNNLGGTHDHVSASPQSDQPFNLDSVW 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1628 319 MobiDBLite consensus disorder prediction 300 319 - -
Lele06g1628 319 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 211 - -
Lele06g1628 319 ProSiteProfiles NAC domain profile. 8 155 IPR003441 GO:0003677|GO:0006355
Lele06g1628 319 SUPERFAMILY NAC domain 6 155 IPR036093 GO:0003677|GO:0006355
Lele06g1628 319 FunFam NAC domain-containing protein 100-like 17 159 - -
Lele06g1628 319 Pfam No apical meristem (NAM) protein 9 134 IPR003441 GO:0003677|GO:0006355
Lele06g1628 319 Gene3D NAC domain 17 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1628 Lele-ChrLele06 10923564 10924890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1628 1 319 NAC Transcription Factor Family AT3G18400 52.853 4.26e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele06g1628 NAM 1.6e-38 No_clan