Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1591 ATGTCCAATCAAGGAGGTACTGCATCACTTGCTATGAAGATTCCTCATAACTATTTCAATATATTTCTTCACTTCCTTTTTCTTTCAATTAGCCAAGCGTCTAGTTTGTTCAACCATGCATATAATACTGTTGTTACAGAGTTTTCCAGGAATGGCAATGTAACTTCAGATTTAATGGCAACCACTAATAAGTTGGACTGTGAATTTTCCGGTCTTCAAAGCCTTTCTTCCAGCGTGCAAAGCACTCCGGAGAAAAATGGCCATTCAGATGATGCCTCAAGAAGTCCAGAACTCCTACAGGAGTTCCTTAAATCTGGTCCAAAAAAGGAGCTTCTACGGACATGCTTTGATAAAGACAAAAAGAACACTTCAGCTAAAGGCAGGGTAACTGAAAATAAGTCAAGGATACTTGGATGTTGGAGAAAGCAGCTAAGTATAGCAAAAGATGCTCGGCGTGTAGATGTACTTTGTTATAGAATATATTTGAGCTACAGGCTTCTAGATGGGACTTCGAGGTTTAAAGAACTCCATGAGATTGTGCAAGAGGCGAAGGCTAAACTGGAAACAGAAGTTGGTCCAGTTAATGGTGTTTCTGCCAAGATGGCAAGGGGCATTGTCAGCAGACTCTCTATTGCCAGTGATGTGCAGAAGTTGTGCTCCCTTGCTGTTGAGAAAGCTAACGAGTGGCTGGCCTCTGTTTCCAATGTAAATCCAGATTCCAGAGAGGGCTCGCTCCCTGCTGCCTGCAAGTTTGTTTTCGAAGAGGTGACAGCTTCCTCAGTCAAAATCATTTTGATTGAAATGTCTAATTCATCTTCTGAGGACATCAAAGGTTTCAAGCTCTGGTATTACAAGAGTGGGGATGAATTGCACAGTAAAGATCCTGTTTGTGTTTTCCCGCAATCTCAGAGGAGGATTCTGATATCAAACCTCCAACCTTGCACAGAATATACATTTCGGATCGTATCTTACACAGATACATGTGATCGCGGTCATTCTGAGGCCAAGTGTTTCACTAAGAGCATTGAAATAATTAGAAAAATTCCTTCTTCGCTAGCTGCTTTGAATCATAATAAAGAGGACCATAAAACTGGAGGCACCTCTTCCGACCCCAAAAGGGAGCCCAATCCGACAATGGCAGACTCTGGATTTAAGGTTCGAGACCTTGGAAAAGTTCTGCGCCTTGCTTGGGCTCAAGAACAAGGTTGCTTTGAGGGGTTTTGCTGTGCCGATGTGAAACATTGCTGTGGAGGAAGTGAAATGGTCAGGCCTAAATATTCAGAAGAGACATTGCCTAAAGTTTCAAGAGGCCTTGATTTAAATGTCGTTTCAGTTCCTGATTTAAATGAAGAATTAACACCACCTTTTGAGTCTTCTAGGGATGAGGATGATAACGGTTGCACCTTGCAGCAGGCTATCGGGGCTGATGACGATGCTGCTTCTCATGATATTGAGAAGATTGGTTTAGCGAGATCCCATGGCAGTGGTGACTCGCAAACCTGGGCCCACAGGCCCACCGGAGAAGTGCCAGCTGTCGACTCACGTGTAGATGCCACAGCATGCAGGAAAAGGTTAGCAAGCACAAATGAAGAGACTCATGATTGTGACAGCACTTTGATAAATGGCTCTCCTTTACGCATTTCTGATGGATCTTGTTCCCTGGATGAGAACTTCGAGTATTGCGTGAAAGTAATTCGTTGGCTAGAATGCGAGGGCCACATTAAGCAGGAATTTCGGTTGAAATTGCTAACATGGTTTAGTTTGAGGTCAACAGAGCAAGAACGTAGGGTGGTCAATACCTATATTCAAACTCTGATTGATGACCCAGGTAGTTTGGCTGGACAACTTGTTGACTCCTTTTCTGATATTATATCTAACAAGAGGCCAAGAAACGGATTCTGCGGTAAGCTTTGGCATTAG 1920 0.4328 MSNQGGTASLAMKIPHNYFNIFLHFLFLSISQASSLFNHAYNTVVTEFSRNGNVTSDLMATTNKLDCEFSGLQSLSSSVQSTPEKNGHSDDASRSPELLQEFLKSGPKKELLRTCFDKDKKNTSAKGRVTENKSRILGCWRKQLSIAKDARRVDVLCYRIYLSYRLLDGTSRFKELHEIVQEAKAKLETEVGPVNGVSAKMARGIVSRLSIASDVQKLCSLAVEKANEWLASVSNVNPDSREGSLPAACKFVFEEVTASSVKIILIEMSNSSSEDIKGFKLWYYKSGDELHSKDPVCVFPQSQRRILISNLQPCTEYTFRIVSYTDTCDRGHSEAKCFTKSIEIIRKIPSSLAALNHNKEDHKTGGTSSDPKREPNPTMADSGFKVRDLGKVLRLAWAQEQGCFEGFCCADVKHCCGGSEMVRPKYSEETLPKVSRGLDLNVVSVPDLNEELTPPFESSRDEDDNGCTLQQAIGADDDAASHDIEKIGLARSHGSGDSQTWAHRPTGEVPAVDSRVDATACRKRLASTNEETHDCDSTLINGSPLRISDGSCSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTYIQTLIDDPGSLAGQLVDSFSDIISNKRPRNGFCGKLWH 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1591 639 Gene3D Immunoglobulins 229 336 IPR013783 -
Lele06g1591 639 ProSiteProfiles Fibronectin type-III domain profile. 245 344 IPR003961 GO:0005515
Lele06g1591 639 PANTHER VIN3-LIKE PROTEIN 2-RELATED 134 639 IPR044514 GO:0010048|GO:0040029
Lele06g1591 639 MobiDBLite consensus disorder prediction 356 382 - -
Lele06g1591 639 CDD FN3 250 326 IPR003961 GO:0005515
Lele06g1591 639 SUPERFAMILY Fibronectin type III 252 333 IPR036116 GO:0005515
Lele06g1591 639 MobiDBLite consensus disorder prediction 77 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1591 Lele-ChrLele06 10552641 10557491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1591 134 632 PHD Gene Family AT3G24440 46.394 3.61e-131 397