Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1587 ATGCTCGTTTTGTTCTTCTTAGGCAATTGTTTAGTCTTCAGATCTGGTGCGATTATGGTAGAGATGGCAAACCGACTAAAGGAAGATGAGAAGAATGAACGAATAATTCGAGGCCTTCTGAAACTTCAAGAGAATCGCAGATGTATTAATTGTGGCAACCTGGGACCACAATATGTGTGCACAAATTTTTGGACATTTGTTTGCACAAACTGTAGTGGAATACACCGAGAATTCACACATCGAGTTAAATCAATTTCGATGGCTAAATTTACTTCACAAGAAGTTAGTGCACTTCAGGAAGGAGGAAATCAGCGTGCAAAGGAAATTTATTTTAAAGAATGGGATCCACAACGTCATTCTCTTCCTGATAGCGGTAATATTGACAGGCTCCGGGACTTTATCAAGCATGTTTATGTGGATAGAAGATATAGTGGTGACAGGAACTATGACAAACCACCAAGAGTTGAGGCATATCAGGGAGGATCTAAAAGCCCACCATATGAGGATGGATATGAACGTCGTTACAGTGACAGGTCTAGTCCTGGTGGCAGAAGTCCTGGATATGATCAAGAAAGTAGACAATATGGGGATTATAGGAAAAGCCCAGGTCGTCCACCAATAATCAATGATTGGCGACGTGAAGATAGATTTGGAGATGGAAGAAGATTTGAAGATCGGAGAACATCTGATGGAGATTATAAGCTGGAAGGGCAATCGCCCGAGAGAGCAAAAGATCGTGATTCTTCTAGTTCGCCTGTTGTACGGCCTGTTAGAGATATTTTGGGAGAAAATGTAGTTCCTCTTCGAATAAGTGAACCCCCCAAAACAAACAGTGGAAAGGCTGCTAATGGCTCTACACTCACACAGAGAACTGCATCTTCCAGTAGCTTAGCATCTAGTAATGGAAACGCAGCAGAAGTTAATCTTGAGACTACTAAGAGCCTTATTGATTTTGATGCTGAGCCCGAACCTCCTGTTACTCCAGCAATTCCTCATGCTCAACCAACTACTGCTGTCCAATCTGCTGTGCAACCAGCAAATTCTAGTGATGACAACTGGGCATCTTTTGATATTGCCCCTGCAGAAAAAACGACCCACGGTCCTTCAAATTTAAGTCCACTTGACTCTGTTCTTTCACAACTATCAATGCCATCCCCTGCCCCTGCTCAGATTTCTGGAGTTCAAGGGCCTCTGCCAGCATCAGCTGTCACTGCCGCTGCTGCTGGAGCTGGAGCTCTAGGCAATTTCTCAGCAGTAGCACCAAGTGGTACTTCTGTAACAGCCCCTGGATTGACAACAGTGCTGCCAATCAACGATGCAGGCCAGTGGGCCAGTGGGCAACACAACCAACCTGCGTTCCCTACCACTGGTAGTCGTCCTGCTACTCAACAATTCATTCCATCAGTAGACGGATCTTTGAACAGTCAGCAGTGGAGTGTATCTCCAGTGCCCACAATGCAAGGGCACCCTAGCATACAAATGCCACATGCATTCCCTGTTGCCTCAAAACCTTCCAATGAGGTTAGCTCTAGCGCTGCTTCACAGCCTTCAAAAGAAATGCAACCAAGTGGAAGAAAAGAACTCCCTGAGGATCTTTTCACTGTAAATTATTCATCGTTCACTTCTCCAGCTCCTGGGTGGCAAATGGGTCCTACCCATGGCATGGGTATCTATATGCAATATAATACTGCACCGCCCATGCCAAGTTTTCCACAGCCATCAAAATCAGCAAATCCATTTGATGTCGGTAGCGAAGCACCTCCAGTTCAAGCCCCAACATTTCCTTCCATGTCATCCTTGCAAGGGACTCTGCCAAGTATACCGCCTTCCTCAGGTGTAATACACCCCCTAAGCCTGGGTAATCCATCCCTTTCCTGGAGCTCACCCCAGTCATCGTATGGTTCAGTACTTCCTCCACAAGCTCAAGTTCATGCACCTGCAATGGCACCAAGGCCATACGTGGGGCAACAAGTGCCAACCAATATGCCAATGCCTAGGCATCAGGAAATTGGGAATTCTGGCACACAGGGAGCAGCTTTTGGCTTCTCAAATCCAAATCAGCAGATAACTGGTATGTTCTCAACCCCTGCTGCGGCAAATTCCTTCTCTGCTGGAGGCAACCCCTTTGGATGA 2133 0.4609 MLVLFFLGNCLVFRSGAIMVEMANRLKEDEKNERIIRGLLKLQENRRCINCGNLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQRAKEIYFKEWDPQRHSLPDSGNIDRLRDFIKHVYVDRRYSGDRNYDKPPRVEAYQGGSKSPPYEDGYERRYSDRSSPGGRSPGYDQESRQYGDYRKSPGRPPIINDWRREDRFGDGRRFEDRRTSDGDYKLEGQSPERAKDRDSSSSPVVRPVRDILGENVVPLRISEPPKTNSGKAANGSTLTQRTASSSSLASSNGNAAEVNLETTKSLIDFDAEPEPPVTPAIPHAQPTTAVQSAVQPANSSDDNWASFDIAPAEKTTHGPSNLSPLDSVLSQLSMPSPAPAQISGVQGPLPASAVTAAAAGAGALGNFSAVAPSGTSVTAPGLTTVLPINDAGQWASGQHNQPAFPTTGSRPATQQFIPSVDGSLNSQQWSVSPVPTMQGHPSIQMPHAFPVASKPSNEVSSSAASQPSKEMQPSGRKELPEDLFTVNYSSFTSPAPGWQMGPTHGMGIYMQYNTAPPMPSFPQPSKSANPFDVGSEAPPVQAPTFPSMSSLQGTLPSIPPSSGVIHPLSLGNPSLSWSSPQSSYGSVLPPQAQVHAPAMAPRPYVGQQVPTNMPMPRHQEIGNSGTQGAAFGFSNPNQQITGMFSTPAAANSFSAGGNPFG 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1587 710 MobiDBLite consensus disorder prediction 442 488 - -
Lele06g1587 710 MobiDBLite consensus disorder prediction 442 525 - -
Lele06g1587 710 MobiDBLite consensus disorder prediction 319 395 - -
Lele06g1587 710 MobiDBLite consensus disorder prediction 568 590 - -
Lele06g1587 710 PRINTS HIV Rev interacting protein signature 64 81 IPR001164 GO:0005096
Lele06g1587 710 PRINTS HIV Rev interacting protein signature 82 103 IPR001164 GO:0005096
Lele06g1587 710 PRINTS HIV Rev interacting protein signature 45 64 IPR001164 GO:0005096
Lele06g1587 710 MobiDBLite consensus disorder prediction 145 305 - -
Lele06g1587 710 Pfam Putative GTPase activating protein for Arf 34 144 IPR001164 GO:0005096
Lele06g1587 710 CDD ArfGap_AGFG 33 143 - -
Lele06g1587 710 MobiDBLite consensus disorder prediction 276 305 - -
Lele06g1587 710 Gene3D Arf GTPase activating protein 22 152 IPR038508 -
Lele06g1587 710 ProSiteProfiles ARF GTPase-activating proteins domain profile. 33 151 IPR001164 GO:0005096
Lele06g1587 710 SUPERFAMILY ArfGap/RecO-like zinc finger 32 144 IPR037278 -
Lele06g1587 710 PANTHER ARFGAP/RECO-RELATED 22 710 IPR044820 GO:0005096
Lele06g1587 710 FunFam Arf-GAP domain and FG repeat-containing protein 1 22 156 - -
Lele06g1587 710 SMART arf_gap_3 33 151 IPR001164 GO:0005096
Lele06g1587 710 MobiDBLite consensus disorder prediction 503 521 - -
Lele06g1587 710 MobiDBLite consensus disorder prediction 365 389 - -
Lele06g1587 710 MobiDBLite consensus disorder prediction 333 354 - -
Lele06g1587 710 MobiDBLite consensus disorder prediction 206 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1587 Lele-ChrLele06 10519447 10527320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1587 33 166 C2H2 Transcription Factor Family AT4G21160 31.206 8.55e-12 65.5