Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1577 ATGGCTTCTCTCTCCAACGGCTACGCCTCTCCGCCCAATGTCAACTTCACTCAGCTCTTCATCAACGGACAGTTCGTTGATTCTTTTTCAGGGAAGACGTTCGAGACGATAGATCCGAGAACAGGGGATGTTATCGCCACCATCGCCCAAGGCACCGAGGAGGACATTGATGCCGCCGTTAAAGCTGCCCGGAACGCCTTTGACTCCGGTCCCTGGCCTCGCATGTCCGGCTCTGAGAGAGGAAGAATACTGATGAAATGGGCAGATTTGATAGACCAAAATGCGGAAGAACTAGCAGCTCTAGACGCCATGGACGCCGGAAAACTATACCAGTGGTGTAAGATGGAGGTTCCTTCAGTCGCAAATTTGTTACGTTACTATGCTGGCGCTGCTGATAAAATCCATGGAGAGGTATTGAAGATGTCAGGCAATTTCCAGGCTTACACTTTGCACGAGCCCATTGGTGTGGTGGGTCACATCATTCCCTGGAACTTCCCCAGCACCATGTTCTTCATCAAGGTTAGCCCTTCTTTGGCCGCTGGCTGCACCATGGTCGTCAAACCCGCTGAGCAAACTCCTCTCTCTGCTCTCTTCTACGCCCATCTCGCTAAGCAGGCTGGCATACCAGATGGTGTGCTTAATGTAGTACATGGGTTTGGCAAAATTGCTGGTGCTGCTCTAAGCTCGCACATGGACGTTGACAAGATTAGCTTTACTGGTTCAACACAAACAGGACGGGAAGTGATGCAGGCTGCGGCTAAGAGTAATTTGAAACAAGTTTCACTTGAATTAGGAGGCAAATCACCCCTCATCATATTTGATGATGCTGATGTCGACAAAGCTGCTGAACTTGCACTCATAGGAATCCTTTTTAACAAGGGAGAAGTCTGCGTTGCAGGGTCTCGGGTGTTTGTGCAAGAAGGAATATATAAGGAATTTGAGAAGAAGCTGGTGGAGAAGGCAAAAGCTTGGGTAGTTGGAGACCCTTTTGATCCCAATGTCCAGCAAGGTCCTCAGGTTGACAAGAGGCAATTTGAGAAGATTTTGTCGTACATAGAGCACGGCAAGAGAGGAGGGGCCACCCTGTTGACTGGGGGGAAAGCAGTGGGCAACAAGGGATACTACATTGAACCCACTGTGTTCACTGACGTTAAGGAGGACATGCTGATAGCACAAGATGAGATATTTGGGCCTGTGATGGCTCTGATGAAGTTCAAGACAATGGAGGAAGCAATAAAGAGTGCGAACAACACAAAATATGGGCTGGCGGCAGGCATAGTGACAAAGAACATTGATACGGCAAACACGGTGTCGAGATCAATTAAAGCAGGAATCATATGGATCAATTGCTATTTTGCATTTGAGCATGATGTTCCTTTTGGAGGATACAAGATGAGTGGATTTGGGAAAGATTTTGGAATGGAAGCCCTTCACAAGTATCTCCAAGTTAAATCCGTTGTCACTCCCATCTACAACTCTCCATGGCTCTAA 1491 0.4795 MASLSNGYASPPNVNFTQLFINGQFVDSFSGKTFETIDPRTGDVIATIAQGTEEDIDAAVKAARNAFDSGPWPRMSGSERGRILMKWADLIDQNAEELAALDAMDAGKLYQWCKMEVPSVANLLRYYAGAADKIHGEVLKMSGNFQAYTLHEPIGVVGHIIPWNFPSTMFFIKVSPSLAAGCTMVVKPAEQTPLSALFYAHLAKQAGIPDGVLNVVHGFGKIAGAALSSHMDVDKISFTGSTQTGREVMQAAAKSNLKQVSLELGGKSPLIIFDDADVDKAAELALIGILFNKGEVCVAGSRVFVQEGIYKEFEKKLVEKAKAWVVGDPFDPNVQQGPQVDKRQFEKILSYIEHGKRGGATLLTGGKAVGNKGYYIEPTVFTDVKEDMLIAQDEIFGPVMALMKFKTMEEAIKSANNTKYGLAAGIVTKNIDTANTVSRSIKAGIIWINCYFAFEHDVPFGGYKMSGFGKDFGMEALHKYLQVKSVVTPIYNSPWL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1577 496 FunFam Aldehyde dehydrogenase, putative 458 484 - -
Lele06g1577 496 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 21 283 - -
Lele06g1577 496 Pfam Aldehyde dehydrogenase family 26 486 IPR015590 GO:0016491
Lele06g1577 496 FunFam Aldehyde dehydrogenase3 266 455 - -
Lele06g1577 496 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 262 269 IPR029510 GO:0016491
Lele06g1577 496 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 10 486 - -
Lele06g1577 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 484 IPR016162 GO:0016491
Lele06g1577 496 SUPERFAMILY ALDH-like 15 492 IPR016161 GO:0016491
Lele06g1577 496 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 290 301 IPR016160 GO:0016491
Lele06g1577 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 266 455 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1577 Lele-ChrLele06 10444910 10448530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1577 12 496 Aldehyde Dehydrogenase Gene Family AT3G24503 71.869 0.0 739