Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1555 ATGGGAGAAGGAGACGGGGGTGATTTCCCTCCGAAGAATATGTTATTGGACTCTGCTGCCGCAGCGTTGCTGTTGGATGGTTCAGGGAAGAAGCTAGCGAGGCAGCTCGATTTTACGGGTTTTGGTGGGGTATCGGGTACTGTGACTTCAAGCGAACATCCGCAATTGCAACTGCAGCCTCAGTCACTGACACAGCAAACCATGGTTGTGATGCCAGTGCCGCATCAGTTAACTCACGATTTCTTATCCAGGAAACCAGAATCTCCAAAATCAAGAGCAAGACCTAACTTTGAAATGAAAGACTCTACTCCAAAGAAGCAAAAACAGTGCAATTATACTGCGAATGTTTTGCATGAACCTGATATTCAAATTGTCTTGAGCAGATACTGCGAATGTTTTGCATCAGGAATATATTGTGAGGGGTGCAACTGTGTAAATTGTTTTAACAATGTTGAGAATGATGCGGCGAGACGGGAGGCTGTTGAAGCTACTTTAGAGCGCAATCCAAAGGCATTTAGGCCAAAAATTGCAAGCAGTCCTCATGGAACACGTAATAGCAGGGAGGAGACTGGAGAAGTTTTATTATTGGGAAAGCACAACAAGGGCTGCCACTGTAAAAAATCAGGATGCCTCAAAAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGCAAATGCCTGGACTGCAAAAATTTTGATGGAAGTGAAGAAAGACAAGCTTTATTCCACGGGGATCAAAATAACAATATAGCATTTATTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTATTCATCCCCTCCAGTATCCAAGAAAAGAAAAGATCAGGAACACTTTTTTGGGCCAACAGTCAAGGGTCCATCTGTTGGCAGGCTTGGGAAGTTTCAACAGTCAAACAATGTCGGAGTTCCTGCACCTTCATCTTCCTTGTCTTGCGTCCCTGGTGCTTGGGTTGGAAGTGCTGCAGTAGGTCCTTCAAAATTTGCATACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAACTTTGCTCTGTTCTGGTGCTAGTATCAGGACAGACCGGGAAGACACTCTCAGGACCAGATCAGAAAAATTTACTGGACAAGCAGCGAATTGAGGATCAGACGGAGACTGCTCTTGCTTCATCAACTCAACAGCAATTGCCTAGTCAAATGGAGACTATCGTCAAGAAAACTATGGCTGATGATTGTTTGAGTGCAAACCAGACAGATAAAATCGGCCCAGATGATTCCAGTTCAGATGGTGCTGATGTCTCAAAGGGGAGGCCAATGTCTCCTGGAACTTTAGCCTTGATGTGCGATGAGCAAGATGCAATGTTCATGACAGCTCCCTCTCCTAGTGGTTTGATGGCCCATGCCGGCAACGCATCTTCACTGTCTACTTGTGGACAAGGCATGACAGAGGAACCTGACATGGCTTTGTTGAGATTCTTTGAAATTGCAAGAATGAAATATGAACTTCCTATTGATGGAATTCATTTGCTCTTGGATTTGTTACACTGGGTGAGTAGACCTCTGTTTCAAAAGTCTGAACACTACTTAGATTCCTTTGTAGAATTGTAA 1623 0.4424 MGEGDGGDFPPKNMLLDSAAAALLLDGSGKKLARQLDFTGFGGVSGTVTSSEHPQLQLQPQSLTQQTMVVMPVPHQLTHDFLSRKPESPKSRARPNFEMKDSTPKKQKQCNYTANVLHEPDIQIVLSRYCECFASGIYCEGCNCVNCFNNVENDAARREAVEATLERNPKAFRPKIASSPHGTRNSREETGEVLLLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFDGSEERQALFHGDQNNNIAFIQQAANAAITGAIGSSGYSSPPVSKKRKDQEHFFGPTVKGPSVGRLGKFQQSNNVGVPAPSSSLSCVPGAWVGSAAVGPSKFAYRSLLADIIQPQHLKELCSVLVLVSGQTGKTLSGPDQKNLLDKQRIEDQTETALASSTQQQLPSQMETIVKKTMADDCLSANQTDKIGPDDSSSDGADVSKGRPMSPGTLALMCDEQDAMFMTAPSPSGLMAHAGNASSLSTCGQGMTEEPDMALLRFFEIARMKYELPIDGIHLLLDLLHWVSRPLFQKSEHYLDSFVEL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1555 540 MobiDBLite consensus disorder prediction 420 446 - -
Lele06g1555 540 PANTHER TESMIN/TSO1-RELATED 57 489 IPR028307 -
Lele06g1555 540 MobiDBLite consensus disorder prediction 80 105 - -
Lele06g1555 540 MobiDBLite consensus disorder prediction 79 105 - -
Lele06g1555 540 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 126 150 IPR005172 -
Lele06g1555 540 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 201 235 IPR005172 -
Lele06g1555 540 ProSiteProfiles CRC domain profile. 106 238 IPR005172 -
Lele06g1555 540 SMART CXC_2 105 153 IPR033467 -
Lele06g1555 540 SMART CXC_2 198 239 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1555 Lele-ChrLele06 10279962 10285864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1555 1 497 CPP Transcription Factor Family AT4G29000 51.321 1.80e-162 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele06g1555 TCR 2.5e-12 No_clan