Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1551 ATGAGTGCTTCGAAGTTCATTAAATGTGTCACTGTTGGAGATGGAGCTGTCGGCAAGACCTGCATGCTCATCTGCTACACCAGCAACAAGTTCCCTACTGACTATATACCCACAGTATTCGACAACTTCAGTGCCAATGTGGCCGTGGATGGGAACATTGTCAATTTAGGACTCTGGGACACAGCAGGTCAGGAAGATTACAGCAGGTTGAGACCACTGAGCTACAGAGGTGCAGACATTTTTGTGTTGGCATTCTCATTGATTAGTAGAGCAAGCTACGAAAATGTTCTTAAGAAGTGGATGCCAGAACTGCGAAGATTTGCACCTAATGTTCCAATTGTTCTTGTTGGCACAAAGTTAGATCTTCGTGATGACAGAGGATTTTTGGCTGATCACATGGGATCTAACATTATAACATCTAATGAGGGGGAAGAACTGAGGAAACAAATAGGCGCAGCAGCTTATATCGAGTGCAGTTCAAAGACTCAACAGAAGGCCTTTAATAATGATGTCTTTTCATGGTTCAGAATGTCAAAGCAGTGTTTGATACTGCAATTAAGGTTGTTCTCCAACCTCCAAGGAGACAGGAAATGGAACGGAAGAAAAGGCATAGAAGATCTGGTTGCTCATTTGCAAGCATCGTGTGTGGAAGCTGTGCAGCTTATTAATACACATCAAAGCATCATTACCAACCTACTTTTGATGAAGAAAGCGATCAAGATCTGTAGAGGGTTTGATTTCCTCATCAGTCTTGTTCTTAACTTTGATTTCAATCTTGGCATGGATGCCTCTTCTGTTTTCCACCTTCCTTTCCCAAGAGTTTTTGTTTCTCATGAACGAAAAAGAAGGGACATAAGTGGTAGGATATATAGGCTAAACCCTCCTATGAATTCAGTTCAGTGGAGCGAGTCTCGTCGTCACAGGCGTCATTGTCTTCCCCCAATAGAGGGAACAATTTTTGAGGACTTGGTAACAGTCTCTGTTCCGATGTCGGACATGGACCCTCCTCCCAAGAGCTGGAGCATCTACACGCGAGCTGAGATTATCGCCAAGTACCAAGTCATGGAGCGGGTCGGCTCTGGAGCTTACTCCGATGTCTACAAAGGCCGTCGTCTCTCCGATGACCTCATCGTCGCCCTCAAAGAAGTTCACGATTACCAATCTTCCGTCCGAGAAATCGAGGCCTTGCAGATCCTCCAGGGGTCCCCTAACGTCGTCGTCTTGCACGAGTACTTCTGGCGCGAGGACGAGGACGCCGTCCTCGTTCTCGAGTTTTTGAGAACTGACTTGTTGACGGTCATCAAAGATGCCAAGAAGGAGGGTGCGGGTCTAAGCGTTGGGGAGATTAAGCAGTGGATGATCCAGATTATTTGCGGCGTCGATGCGTGTCACGCAAATATGATCATGCATCGAGATTTGAAGCCCAGTAATTTGTTGATTTCAGAGGACGGCGTGCTGAAGTTGGCTGATTTTGGACAGGCGAGGATACTTATGGAGCCTGGATTTCATGCTATGGATGAAAACCCCCAACCTTATGAAGATGATATTTCAAATAATGAGAGATATCCTCAACATCCTGAAGTATTTCCTCAGACACACAACCAAAACCAAGAGGGCTATGGAAATCAAGAACAGGGAACTGTAACTCAAGATGAATATTATAGAGAATTAGAAGAGATAAAAACTAAGAGCTCCACAGATGACATGGATAAGGATACGAACTTCCAGGATGGAAATACATCTTGTCTTGCAACTTGCACAATAAGTGACATAGAAGATGATTTTATGAAGGGTTCGTTTACTTATGAAGCAGATGTCAGAGACAGTGAAGAAGATTGTCTCACGTCATGCGTTGGAACCCGATGGTACAGGGCTTCTGAACTGCTTTATGGATCATGTGACTATGGGTTAGAGATTGATCTCTGGTCATTGGGCTGCATCTTTGCAGAGCTCCTAACTCTGGAGCCCTTATTTCCTGGGGCAGGTGACATTGATCAGCTCAGCAGAATTATTGATGTTTTAGGTAACCTCAATGAGGAAGTTTGGTCTGGTTGTTCCAAGCTTCGTGATTATGAAAAAATCTCGTTCACCAAGGTGGAGAACACTCCAGGTATTGAAGGCTGCCTGCCAAACCGATCCCCGGATGAAGTTTCTCTAGTGAAGAAACTGGTCTGTTATGATCCGGCTAGAAGAGCTACTGCAATGGAACTTCTCCGAGACAAGTATTTTGGTGAAGAACCTCTTCCTGTACCTGTTTCTGAGCTGCGAGTTCCTTTGACAAAAACTTCACACGATGAAGACTCTGGTCATAATCTCAATGATGTGGATTTCAATTCTGATTGA 2343 0.446 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGNIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDRGFLADHMGSNIITSNEGEELRKQIGAAAYIECSSKTQQKAFNNDVFSWFRMSKQCLILQLRLFSNLQGDRKWNGRKGIEDLVAHLQASCVEAVQLINTHQSIITNLLLMKKAIKICRGFDFLISLVLNFDFNLGMDASSVFHLPFPRVFVSHERKRRDISGRIYRLNPPMNSVQWSESRRHRRHCLPPIEGTIFEDLVTVSVPMSDMDPPPKSWSIYTRAEIIAKYQVMERVGSGAYSDVYKGRRLSDDLIVALKEVHDYQSSVREIEALQILQGSPNVVVLHEYFWREDEDAVLVLEFLRTDLLTVIKDAKKEGAGLSVGEIKQWMIQIICGVDACHANMIMHRDLKPSNLLISEDGVLKLADFGQARILMEPGFHAMDENPQPYEDDISNNERYPQHPEVFPQTHNQNQEGYGNQEQGTVTQDEYYRELEEIKTKSSTDDMDKDTNFQDGNTSCLATCTISDIEDDFMKGSFTYEADVRDSEEDCLTSCVGTRWYRASELLYGSCDYGLEIDLWSLGCIFAELLTLEPLFPGAGDIDQLSRIIDVLGNLNEEVWSGCSKLRDYEKISFTKVENTPGIEGCLPNRSPDEVSLVKKLVCYDPARRATAMELLRDKYFGEEPLPVPVSELRVPLTKTSHDEDSGHNLNDVDFNSD 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1551 780 Pfam Ras family 8 165 IPR001806 GO:0003924|GO:0005525
Lele06g1551 780 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Lele06g1551 780 SMART ras_sub_4 4 181 - -
Lele06g1551 780 ProSiteProfiles Protein kinase domain profile. 352 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1551 780 FunFam Cyclin-dependent kinase F-1 343 437 - -
Lele06g1551 780 SMART rho_sub_3 9 179 IPR001806 GO:0003924|GO:0005525
Lele06g1551 780 Gene3D Transferase(Phosphotransferase) domain 1 344 542 - -
Lele06g1551 780 Gene3D - 1 175 IPR027417 -
Lele06g1551 780 PANTHER CELL DIVISION PROTEIN KINASE 351 749 - -
Lele06g1551 780 ProSiteProfiles small GTPase Ras family profile. 2 235 IPR001806 GO:0003924|GO:0005525
Lele06g1551 780 PRINTS Transforming protein P21 ras signature 109 122 - -
Lele06g1551 780 PRINTS Transforming protein P21 ras signature 30 46 - -
Lele06g1551 780 PRINTS Transforming protein P21 ras signature 47 69 - -
Lele06g1551 780 PRINTS Transforming protein P21 ras signature 7 28 - -
Lele06g1551 780 TIGRFAM small_GTP: small GTP-binding protein domain 6 157 IPR005225 GO:0005525
Lele06g1551 780 Pfam Protein kinase domain 611 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1551 780 Pfam Protein kinase domain 352 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1551 780 FunFam Rho family GTPase 4 179 - -
Lele06g1551 780 ProSiteProfiles small GTPase Rho family profile. 1 183 - -
Lele06g1551 780 SMART serkin_6 352 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1551 780 ProSiteProfiles small GTPase Rab1 family profile. 2 215 - -
Lele06g1551 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lele06g1551 780 SMART rab_sub_5 7 185 - -
Lele06g1551 780 Gene3D Transferase(Phosphotransferase) domain 1 579 752 - -
Lele06g1551 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 164 IPR027417 -
Lele06g1551 780 MobiDBLite consensus disorder prediction 760 780 - -
Lele06g1551 780 CDD Rop_like 6 164 - -
Lele06g1551 780 SUPERFAMILY Protein kinase-like (PK-like) 336 761 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1551 Lele-ChrLele06 10256406 10262771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1551 336 780 Core Cell Cycle Gene Families AT4G28980 63.516 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Lele06g1551 Pkinase 4.3e-32 CL0016