Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1547 ATGTCTGTGCCACACGAGCAGGACTATGTAGGCTTGACAGAGCTTCCTTCAATGGAAAAAGGCTTCGACAAGTTTTCTCAGAGAAGCAACAACAGTGGCTTGAACCTCAAGGCCACTGAGCTACGACTTGGACTGCCTGGGTCCGAGTCACCGGAGAGGGACTGCGCCGGAGCCGGCGCCGGGAAGAGTTCGGTGGTCTGTGGGGCCAAGAGGGGTTTCTCAGACACCATTAACGGTGGCTCTGGAAAGTGGGCTCTGTCAGGGAATGGAGGATCTGAAGCGGGTTTGGGTAAAGATGGTGGCTTGTTCTCTCCCAGAGGTGGCTCCAACCCTTCCCTTACCAAAGACAGCATCCCAAACTCACCAAAGCCATTGTTGCATGAGAAGAAGCCCCAGATATCTGCTCCTCCTCCAAAGGAACAAGTTGTGGGGTGGCCACCAATAAGATCTTTCAGGAAGAACACGATGGCTTCAAGTCCTCAAAAGAACGGTGAAGATGATGCAGAAGCCAAGTCTGGATGTCTTTATGTAAAAGTAAGCATGGATGGTGCCCCTTACTTGAGGAAAGTGGATCTCAAAAACTTTGCCAGTTACCGCCACCTTTCTTCTGCACTCGAAAAGATGTTCAGATGCTTCACAATCAGTCAATGTGGATCTCACGGAATTTCTAGTCATGATAATTTGAGTGAAAGTAGGTTGAAGGATCTGCTTCATGGTTCAGAATATGTGCTCACCTATGAAGACAAGGATGGGGATTGGATGCTAGTTGGTGATGTGCCCTGGGAGATGTTCACTGCCTCTTGCAAGAGATTGAGGATCATGAAGAGTTCTGAAGCAATTGGCCTAGCACCAAGAGCAATGGAGAAGTGCAAAAGCCGAAACTAG 885 0.4927 MSVPHEQDYVGLTELPSMEKGFDKFSQRSNNSGLNLKATELRLGLPGSESPERDCAGAGAGKSSVVCGAKRGFSDTINGGSGKWALSGNGGSEAGLGKDGGLFSPRGGSNPSLTKDSIPNSPKPLLHEKKPQISAPPPKEQVVGWPPIRSFRKNTMASSPQKNGEDDAEAKSGCLYVKVSMDGAPYLRKVDLKNFASYRHLSSALEKMFRCFTISQCGSHGISSHDNLSESRLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTASCKRLRIMKSSEAIGLAPRAMEKCKSRN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1547 294 FunFam Auxin-responsive protein 169 286 - -
Lele06g1547 294 MobiDBLite consensus disorder prediction 96 145 - -
Lele06g1547 294 Pfam AUX/IAA family 39 285 IPR033389 -
Lele06g1547 294 ProSiteProfiles PB1 domain profile. 174 276 IPR000270 GO:0005515
Lele06g1547 294 Gene3D - 168 288 - -
Lele06g1547 294 SUPERFAMILY CAD & PB1 domains 172 275 - -
Lele06g1547 294 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 34 281 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1547 Lele-ChrLele06 10207041 10208855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1547 150 292 B3 DNA Binding Superfamily AT1G19850 29.371 6.42e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele06g1547 AUX_IAA 2.9e-86 CL0072