Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1543 ATGTTGAGGGGCTCAGTCACAGCGTTACAAATATGCCCCTCTGCATTATCCGCAAGTGCCCGTGATGTGAAACAACTCAAACGACAAAATTGCCCTTGCCTGTACGGTCCGTGTCATCGTGCACTTGGGAATCTATCTGAGGCTTTGGTTGCTCTTCTTCCAAATACACGGATCCTCTTGCAATCTCGTATACTCTTTTTAGATTCAGATCGAAGAGTTTTAGAACCGTACTTTCTCTTTTATGCTCTGCTAGTTTCTCTATCTCTCTTCTCACCATTCGCCATGGAACGGATTGTAGGCGGCAAGTATAAGCTTGGCCGCAAGATCGGAAGCGGATCATTCGGTGAAATTTATCTGGCTACGCATATTGATACTTTCGAGATCGTCGCCGTCAAGATCGAGAATACTAAAACAAAGCATCCGCAGTTGCTTTATGAGGCAAAACTGTACAACATTCTTCAAGGAGGAAGTGGCATTCCTAGCATAAGATGGTCTGGTGTTGATGGGGAGGAGAATGTGCTTGTTCTAGATTTGCTGGGACCGAGTCTTGAGGATCTGTTTGTTTATTGTGGAAGAAAGTTTTCATTGAAGACAGTCTTAATGCTGGCTGATCAAATGATCACTAGAATAGAATATGTGCACTCTAAGGGATTTTTGCATAGGGATATAAAACCTGATAACTTTCTCATGGGCCTTGGTCGGAAGGCTAACCAGGTTTACATAATTGATTTTGGTCTTGCGAAAAGGTATCGGGACTCCACAACCAACCGCCACATCCCTTATAGGGAGAACAAAAATTTAACAGGGACTGCACGTTATGCAAGTTGCAATACTCATCTTGGGATTGAACAAAGCCGACGGGATGACTTGGAGTCACTGGGTTATGTTCTTCTGTACTTCCTGAGAGGAAGCCTTCCTTGGCAAGGTCTAAAAGCTGCAACAAAGAAGCAGAAGTATGATAAAATATGTGAAAAGAAATTGTCAACTCCCATTGAGGTCCTCTGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTCCACTACTGCCACTCTCTGACTTTTGACCAGCGGCCTGATTACGGATTCTTGAAGCGTGTATTTAGGGAACTATTTACTCGAGAAGGTTATGAATTTGACTACGTATTTGATTGGACCATCTTGAAGTATCAGCAGGCACAAAAGAACAAATCTCAGCCACGCATACCTCCGATTACTGGAGCAAGCAACAGTCGTGCAATGCCAATGGATGTTGACAACCATCATGGTGATGTATCTGATCGTATTAGATCAGGCAATGCTACAAGTTCTGGTGTTAAATTGCAGTTTAAATCACCAATGGGCAAAATTTTAAGTTCTGAACATCCTTTTAAGAAGAATGTTTTTGGAGAGGAGAATATGCCCTCTACGTCGTATCCTCTTTCTGGTACCTCCAAGAGGGACTCCTTGAAGCCCATCATGTCTGCTGAAGCTGCTAATTCTGGACATGAACATGGTAAAATTGGCCCTTCTAGCAGCTGGATTTCATCTCTGCATCGTGCCAAATGA 1545 0.4317 MLRGSVTALQICPSALSASARDVKQLKRQNCPCLYGPCHRALGNLSEALVALLPNTRILLQSRILFLDSDRRVLEPYFLFYALLVSLSLFSPFAMERIVGGKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENTKTKHPQLLYEAKLYNILQGGSGIPSIRWSGVDGEENVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKLSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRVFRELFTREGYEFDYVFDWTILKYQQAQKNKSQPRIPPITGASNSRAMPMDVDNHHGDVSDRIRSGNATSSGVKLQFKSPMGKILSSEHPFKKNVFGEENMPSTSYPLSGTSKRDSLKPIMSAEAANSGHEHGKIGPSSSWISSLHRAK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1543 514 MobiDBLite consensus disorder prediction 498 514 - -
Lele06g1543 514 FunFam Casein kinase I isoform delta-like 95 434 - -
Lele06g1543 514 ProSiteProfiles Protein kinase domain profile. 103 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1543 514 MobiDBLite consensus disorder prediction 463 481 - -
Lele06g1543 514 Gene3D Transferase(Phosphotransferase) domain 1 88 421 - -
Lele06g1543 514 MobiDBLite consensus disorder prediction 460 514 - -
Lele06g1543 514 CDD STKc_CK1_delta_epsilon 102 376 - -
Lele06g1543 514 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Lele06g1543 514 Pfam Protein kinase domain 103 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1543 514 SMART serkin_6 103 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1543 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Lele06g1543 514 SUPERFAMILY Protein kinase-like (PK-like) 98 384 IPR011009 -
Lele06g1543 514 PANTHER CASEIN KINASE-RELATED 101 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1543 Lele-ChrLele06 10160255 10165907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1543 91 330 AGC Kinase Gene Family AT3G08720 25.306 1.52e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele06g1543 Pkinase 1.2e-27 CL0016