Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1539 ATGGGGTGTGTTTATTCAAGGGTTTGCATAGGTGAGGTTTGTAGTCCAAGAAATTCCAGGATAAATGAAGGTCGAAATGCGAAAACTAGTGAGGCTGCCTGGTTGTCTCCTGCGTCCTCGGATGTTCAGGAAGGTGAAGTTAGAGACCAATTTAACCAATTGAGCTTAACCAGAGACTCTGAAGTAGGCATCAGAAGGCTATCTAGGGTTTCAGCGCAGTTTCTCCCACCCGATGGCTCGCGAGCAGTGAAGATCCCTTCGGGGAACTTTGAATTGCGTTATTCATACTTGTCACAGAGAGGTTATTACCCTGATGCTCTGGATAAGGCCAACCAAGACAGTTTTTGCATTCACACCCCGTTTGGTACAAACCCTGATGATAATTTCTTTGGGGTTTTCGATGGGCACGGAGAGTTTGGGACTCAGTGTTCGCAGTTCGTGAAGCGAAAACTATGTGAGAATTTGCTTAGAAATGGTAAATTCCGGGTAGATGCCGTGGAGGCCTGTCACGCCGCGGTTTTAGCGACAAACTCGCAGTTGCATGCTGATGTTTTGGATGATAGCATGAGTGGTACTACAGCAATTACGGTTTTGGTTCGGGGTAGGACTTTATACGTAGCCAATTCAGGTGATTCTAGGGCGGTGATTGCAGAGAGGAGAGGAAACGATATTGTGGCAGTCGACTTATCCATGGATCAAACACCTTTTAGGTCAGACGAGCTTGAACGGGTCAAGCTCTGTGGAGCTAGAGTTCTTACTCTGGATCAGATTGAAGGGCTCAAGAATCCTGATGTTCAATGTTGGGGAACAGAAGAAGGAGATGATGGTGACCCGCCTAGATTGTGGGTGCCGAACGGCATGTACCCTGGCACAGCTTTCACTAGAAGTATTGGTGATTCAATTGCCGAGACCATTGGTGTCGTTGCTACCCCTGAAATTGTTGTTTTCGAGCTCACAGCAAACCATCCTTTCTTTGTGCTTGCCAGCGACGGTGTCTTTGAGTTTCTATCTAGTCAGACTGTTGTTGAAATGGTTGCTAAATTCAAAGATCCTCGTGATGCTTGTGCTGCAATTGTGGCTGAATCTTATCGACTTTGGCTACAGTATGAAACTCGTACCGATGATATTACCATTATTGTTGTTCATGTTAATGGACTAAACAGTCCTGCTGCTGGTCAATCTGCCAGTTATGGTGATGTTAGAACCCCAGTTCCTCAAGTTGTTGAGGTGACAGGATCAGAATCACCTTCCACCCTAAGCTGGAACTCCAAGAACCCTAGGGCAAGGCATGATTTATCAAGGGCGCGTATACGAGCAATTGAAAATTCCTTAGAAAATGGGCAAACTTGGGTTCCTCCATCTTCAGCTCATAGGAAAACATGGGAGGAAGAAGCACACATTGAGCGCGCACTGCATGATCATTTTCTCTTCAAAAAACTTACTGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAAGTTCAACCTGGAGATGTTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTCTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAGGAACAAAACGGGGAAGTGCCTAGGGTTTTGCAGCACTACACAGCAGAAAAATTGTCTTGTTTTGGAGAACTTGCTCTAATGTATAATAAACCACTTCAGGCCTCTGTACGTGCTGTAAGAGAAGGAACACTGTGGGCCTTAAGGCGAGAAGACTTTCGAGGAATTTTAATGTCAAAATTCTCTAACTTATCATCATTGAAGTTGCTTCGGTCAGTAGACCTCCTTTCAAAATTGACAATCTTACAACTCAGTCAGATCTCGGAGTCCCTTTCTGAAGTTTCTTTCTCAGATGGCCAAACAATAATTGATCAAAATGAAGTGGCTGCGTTGTACATAATCCAGAAGGGACAAGTGAGAATAACTTTTAATTCAGAATTACTCAGAAACCCAAATGCTTGCAGCCTGAAGCCTGACAATCAAAATGAGAATGAACTACAGAGCACGAAGGAGCTATCGATAGAGAAGTCTGAGGGAAGTTATTTTGGTGAATGGACTCTTCTTGGTGAAAATATTGGAACCTTTAAGGCTGTTGCTGTGGGTGATGTGTTATGTACTGTACTAACAAAGGAAAAATTTGAATCAGAAATTGGCCCCTTGAAAAAGATTTCTCTGGAAGATCAGAAGTCAAAGGACAATTCCTCAGACTATTTGAAGGAATCAACTAAAAGTCTTAATTTTTCTTCCCTTGATAAAATCCATCTCTCAGATTTGGACTGGAAAAAGAGTGTATATTCTACTGACTGTTCTGAGGTTGGGCTTACTCTATTAGGAGACTCAGAGAATGTGCTTACTTTGAAGAGATTCTCTAAGCAAAAGGTGAAAAGGCTGGGAAAGGAAGCACAAGTTTTAAAAGAGAAAAATTTGATCAAGGGCATGAGCTCTTCGGCTTGTATTCCACAGGTTCTGTGCACCTGTGCTGATCGAGTATATGCTGGGATACTACTAAATACACGGATCGCTTGTCCATTGTCTTCCATACTCACAAGTCCTTTTGGCGAATCATCAGCACGATTTTGTGCTGCTTGTGTTGTCACTGCCTTAGAAGATTTACATAAGAATGGTGTTCTTTACAGAGGGGTATCACCTGATCTTCTGACTTTGGACCAAACTGGATGTATACAGCTAGTGGACTTCAGGTTTGGGAAGAAGCTCTCAGATGAAAGAACATTCACAATTTGTGGAATGGCAGACTCCTTAGCTCCGGAGATTGTTCTGGGAAAAGGCCATGGTTTCCCTGCTGACTGGTGGGCATTGGGAGTTCTGATTTATTTTATGTTACGGGGTGAGATGCCTTTTGGATCTTGGAGAGAAAATGAGCTTGATACGGTGGCCAAAATTGCAAAACGGAAGCTAAACCTTCCAGAAACTTTCAGCCCAGAGGCTGTTGATCTCATCACTAAGTTACTTGATGGTGACGAAAGCACTAGACTTGGCAGCCAAGGTCCTGATTCTGTGAAAAGCCATCCTTGGTTTAATGGTGTTGACTGGGAAGGGATAAGAAACCATAGCTTTCCTGCTCCTCCAGAAATTCTCTCTCGTATAACTCAATACTTGGAAATTCATTCTGAGGATGGCGCTGTTGCCCAAGTTTCCCCGTCAGAGGAGGCAGATGAACTCAACATTCCTGAATGGCTTGAGGACTGGTAG 3231 0.4367 MGCVYSRVCIGEVCSPRNSRINEGRNAKTSEAAWLSPASSDVQEGEVRDQFNQLSLTRDSEVGIRRLSRVSAQFLPPDGSRAVKIPSGNFELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTNPDDNFFGVFDGHGEFGTQCSQFVKRKLCENLLRNGKFRVDAVEACHAAVLATNSQLHADVLDDSMSGTTAITVLVRGRTLYVANSGDSRAVIAERRGNDIVAVDLSMDQTPFRSDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVFELTANHPFFVLASDGVFEFLSSQTVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITIIVVHVNGLNSPAAGQSASYGDVRTPVPQVVEVTGSESPSTLSWNSKNPRARHDLSRARIRAIENSLENGQTWVPPSSAHRKTWEEEAHIERALHDHFLFKKLTDSQCHVLLDCMQRVEVQPGDVIVKQGGEGDCFYVVGSGEFEVLATQEEQNGEVPRVLQHYTAEKLSCFGELALMYNKPLQASVRAVREGTLWALRREDFRGILMSKFSNLSSLKLLRSVDLLSKLTILQLSQISESLSEVSFSDGQTIIDQNEVAALYIIQKGQVRITFNSELLRNPNACSLKPDNQNENELQSTKELSIEKSEGSYFGEWTLLGENIGTFKAVAVGDVLCTVLTKEKFESEIGPLKKISLEDQKSKDNSSDYLKESTKSLNFSSLDKIHLSDLDWKKSVYSTDCSEVGLTLLGDSENVLTLKRFSKQKVKRLGKEAQVLKEKNLIKGMSSSACIPQVLCTCADRVYAGILLNTRIACPLSSILTSPFGESSARFCAACVVTALEDLHKNGVLYRGVSPDLLTLDQTGCIQLVDFRFGKKLSDERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAVDLITKLLDGDESTRLGSQGPDSVKSHPWFNGVDWEGIRNHSFPAPPEILSRITQYLEIHSEDGAVAQVSPSEEADELNIPEWLEDW 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1539 1076 CDD CAP_ED 476 585 IPR000595 -
Lele06g1539 1076 SMART PP2C_4 83 381 IPR001932 -
Lele06g1539 1076 SUPERFAMILY Protein kinase-like (PK-like) 758 1047 IPR011009 -
Lele06g1539 1076 ProSiteProfiles cAMP/cGMP binding motif profile. 602 726 IPR000595 -
Lele06g1539 1076 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Lele06g1539 1076 Pfam Protein kinase domain 785 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1539 1076 PRINTS cAMP-dependent protein kinase signature 720 732 - -
Lele06g1539 1076 PRINTS cAMP-dependent protein kinase signature 512 526 - -
Lele06g1539 1076 PRINTS cAMP-dependent protein kinase signature 547 556 - -
Lele06g1539 1076 PRINTS cAMP-dependent protein kinase signature 497 511 - -
Lele06g1539 1076 SMART cnmp_10 476 599 IPR000595 -
Lele06g1539 1076 SMART cnmp_10 602 739 IPR000595 -
Lele06g1539 1076 Gene3D Transferase(Phosphotransferase) domain 1 850 1035 - -
Lele06g1539 1076 ProSiteProfiles cAMP/cGMP binding motif profile. 476 585 IPR000595 -
Lele06g1539 1076 SUPERFAMILY cAMP-binding domain-like 458 586 IPR018490 -
Lele06g1539 1076 Gene3D Jelly Rolls 448 591 IPR014710 -
Lele06g1539 1076 Gene3D Phosphorylase Kinase; domain 1 771 849 - -
Lele06g1539 1076 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 88 385 - -
Lele06g1539 1076 Gene3D - 87 384 IPR036457 -
Lele06g1539 1076 Coils Coil 794 814 - -
Lele06g1539 1076 Pfam Cyclic nucleotide-binding domain 621 722 IPR000595 -
Lele06g1539 1076 Pfam Cyclic nucleotide-binding domain 495 586 IPR000595 -
Lele06g1539 1076 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 450 590 - -
Lele06g1539 1076 CDD PP2Cc 109 383 IPR001932 -
Lele06g1539 1076 SMART serkin_6 772 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1539 1076 CDD CAP_ED 602 721 IPR000595 -
Lele06g1539 1076 Gene3D Jelly Rolls 592 741 IPR014710 -
Lele06g1539 1076 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 457 1037 - -
Lele06g1539 1076 SUPERFAMILY cAMP-binding domain-like 595 726 IPR018490 -
Lele06g1539 1076 Pfam Protein phosphatase 2C 120 362 IPR001932 -
Lele06g1539 1076 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Lele06g1539 1076 ProSiteProfiles Protein kinase domain profile. 746 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1539 1076 SUPERFAMILY PP2C-like 82 386 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1539 Lele-ChrLele06 10120669 10128365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1539 1 1076 PP2C-type Phosphatase Gene Family AT2G20050 68.120 0.0 1504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Lele06g1539 Pkinase 2e-29 CL0016