Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1532 ATGGCTGAGCTACCCAGCTCAGAGATAGAGACAAGCATTCACACTAACTGGTCTTCACAATCTCCATCATCGTCGTCGTCTTCATCTTCGTCGTTGTCGTCAAAATCTGGGTTATCTCATTGTTTACAGAACTCTGCTTCTGAGCCATTACCTGCAGAACAGAGGAAGCTGAAACGAGGCCGAGATAGCAGCAACAGCAAACACCATGTGTACAGAGGAGTTCGAATGCGGGCGTGGGGCAAGTGGGTGTCGGAAATCCGGGAGCCCAGGAAGAAGAATCGGATCTGGCTCGGCACCTTCGCCACGCCGGAGATGGCGGCGCGTGCCCACGACGTGGCCGCGCTGGCTATCAAAGGCAACTCTGCCATTCTCAACTTCCCCGAACTCGCGGGTTCTCTGCCCCGACCCGCTTCCAACTCTCCCAGAGACGTTCAGTCCGCCGCAGCTGAGGCCGCCGCCATGGAAGTATTCAGTCCTCCAACGTCGTCGCTCTCGTCTTCGTGTTCATCGTCCTCATTGGCAATGTCCACCTCCTCCGGAGACTCCTCCGGCGACCCGTCCACCCCGGAGGAAGAACTCTGCGAGATAGTGGAGCTACCGCCTTTGGGAAGCAGCTTCGAGTCGCCCGACCCGGGTAACGAATTCGTGTTCTTTGACCCGGTGGATGGGTGGCTCTACCCTCACCCGTGGTATCACAGCATTTATGATGAAAAGGATTGTGATGGTTATTTCCTTGGGGAAGACACGTTAATGCAAGAAGCCGAGAGTGGATTCCCTAAAGTGGAGAGGGGTAGTTCTATGAATGCCCCAAAGTGGCAAGAGCTTTGA 828 0.5531 MAELPSSEIETSIHTNWSSQSPSSSSSSSSSLSSKSGLSHCLQNSASEPLPAEQRKLKRGRDSSNSKHHVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGNSAILNFPELAGSLPRPASNSPRDVQSAAAEAAAMEVFSPPTSSLSSSCSSSSLAMSTSSGDSSGDPSTPEEELCEIVELPPLGSSFESPDPGNEFVFFDPVDGWLYPHPWYHSIYDEKDCDGYFLGEDTLMQEAESGFPKVERGSSMNAPKWQEL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1532 275 SUPERFAMILY DNA-binding domain 70 128 IPR016177 GO:0003677
Lele06g1532 275 MobiDBLite consensus disorder prediction 168 186 - -
Lele06g1532 275 Gene3D AP2/ERF domain 70 128 IPR036955 GO:0003700|GO:0006355
Lele06g1532 275 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 26 204 - -
Lele06g1532 275 MobiDBLite consensus disorder prediction 1 69 - -
Lele06g1532 275 MobiDBLite consensus disorder prediction 168 192 - -
Lele06g1532 275 FunFam Ethylene-responsive transcription factor 2 69 128 - -
Lele06g1532 275 MobiDBLite consensus disorder prediction 256 275 - -
Lele06g1532 275 SMART rav1_2 70 133 IPR001471 GO:0003700|GO:0006355
Lele06g1532 275 MobiDBLite consensus disorder prediction 8 50 - -
Lele06g1532 275 Pfam AP2 domain 70 119 IPR001471 GO:0003700|GO:0006355
Lele06g1532 275 ProSiteProfiles AP2/ERF domain profile. 70 127 IPR001471 GO:0003700|GO:0006355
Lele06g1532 275 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Lele06g1532 275 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Lele06g1532 275 MobiDBLite consensus disorder prediction 52 69 - -
Lele06g1532 275 CDD AP2 71 129 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1532 Lele-ChrLele06 10077871 10079143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1532 44 236 AP2-EREBP Transcription Factor Family AT5G11590 62.944 3.11e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele06g1532 AP2 2.1e-13 CL0081