Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1520 ATGGAACAACCCTTGCACCTGGACTTGGACGACTTCCAACTCGAACGAGTCAGCTCCGACTCCCCCTTCTCCACCTCCTCTTCCTCTTCCACCTCACCCTTCGTACTCGCCGCCGAATATTCCCGCAGCACCTCCAGCTCCGGCGACATTTCCACCATCAGCTCTGGCTCCGGCGACATTCCGGGGGCCGCGATCTCCGAGGCCCTGCCCTCGCCTCCCTCGCTCGATCCCCCTCCGTCCCAAGAGATGACCGCCACCAGGGACAAGTGCGTCGGAAGGAATAACAAGGGAGTCAGTTGGGGATTTACGTCGGTGATTGGGAGGAGGAAAGAGATGGAGGACGCTATTGCTGTTATCCCAGGGTTTATATCCCTCCAGTGCGATCGCGTCGGTGGATGTACGGCTCCATGCTCGAAATCCTCCGGCGAGATATCGCCCGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGATCTCAGGTGGCCAATTTTTGTGCCAAACGGATGCATGAAGCTATAGCGGAAGAGTGGGATCGAGACATAGCTCAGGGAACTGAATGGAAGGGAAGGTGGGAGGCCGTTTTTGCTAGTGGCTTTGAGAAGACTGACAATGAAATCTTAACAGATGCGGTGGCACCAGAAATGGTAGGATCTACTGCTGCTGTGGTGGTTCTATCTCGTTGCCAAATCATTACATCTAACTGTGGCGACTCAAGGGCAGTTCTTTGCCGCGGCACACAAACAATCCCCTTGACTGTGGATCAGAAGCCTGATAGACAAGATGAACTATTGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGAGTGTTTGGAGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTATTTGAGGCCATGGATTATTCCAGTGCCTGAGACCACTTTTACAACGAGAAGCGAGGAGGACGAATGCCTAATATTGGCAAGTGACGGGCTTTGGGATGTAATGACGAATGCAGAGGTTGGGGAAGTTGCACGCCATATTCTGAGACGACGTAGAAGGTCCTTGTCCATGGAAGAAACTCCACCTGCCCAAGTGGTGGCTGATAGCCTCACAGAGATTGCATGTGCTAGAAATAGTAAAGACAATATTTCGATCATAGTTATTGATCTGAAATCAAAGAGAAAACGTCAGCAAAGGCATCCTTTGACTTCATAA 1197 0.5163 MEQPLHLDLDDFQLERVSSDSPFSTSSSSSTSPFVLAAEYSRSTSSSGDISTISSGSGDIPGAAISEALPSPPSLDPPPSQEMTATRDKCVGRNNKGVSWGFTSVIGRRKEMEDAIAVIPGFISLQCDRVGGCTAPCSKSSGEISPVHFFGVYDGHGGSQVANFCAKRMHEAIAEEWDRDIAQGTEWKGRWEAVFASGFEKTDNEILTDAVAPEMVGSTAAVVVLSRCQIITSNCGDSRAVLCRGTQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPETTFTTRSEEDECLILASDGLWDVMTNAEVGEVARHILRRRRRSLSMEETPPAQVVADSLTEIACARNSKDNISIIVIDLKSKRKRQQRHPLTS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1520 398 ProSitePatterns PPM-type phosphatase domain signature. 149 157 IPR000222 GO:0043169
Lele06g1520 398 SMART PP2C_SIG_2 128 384 IPR001932 -
Lele06g1520 398 SMART PP2C_4 88 382 IPR001932 -
Lele06g1520 398 ProSiteProfiles PPM-type phosphatase domain profile. 99 384 IPR001932 -
Lele06g1520 398 CDD PP2Cc 101 384 IPR001932 -
Lele06g1520 398 SUPERFAMILY PP2C-like 91 385 IPR036457 -
Lele06g1520 398 FunFam Protein phosphatase 2C 51 92 392 - -
Lele06g1520 398 MobiDBLite consensus disorder prediction 42 85 - -
Lele06g1520 398 Gene3D - 86 394 IPR036457 -
Lele06g1520 398 MobiDBLite consensus disorder prediction 42 59 - -
Lele06g1520 398 Pfam Protein phosphatase 2C 102 377 IPR001932 -
Lele06g1520 398 PANTHER PROTEIN PHOSPHATASE 76 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1520 Lele-ChrLele06 9986350 9991390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1520 100 397 PP2C-type Phosphatase Gene Family AT4G26080 49.686 2.26e-100 303