Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1518 ATGGTGTCCCTTGATTGGGATTGTTCCCTTCATCTTCCTCTGTGGGTTTCCGAAACTGAGAAAGCTTCCATTGAGAAGCGTCTTGAAGAATGGACTGAAAGGTTGAAAGAAAGTGGAGCTGATATTGCTTCTCTTTTAGCATGCTTAAAGAAGCCCTTACTCCCTCTGTGGATTTCACAGAGAACTCTTTGGATAAATGAAGTGCCCAACCATGATTCTTGGGATTTCATCATACTAGTGTTTGCATCTTCCTCAACTGGCATAATTCAGCGTAGGACTACCTCTGAGTTTAGCTGGAGTTATATACCAGGTGCTGGGATGATGAAGAAAGTTGGGCAAGGGGTTTATCTCCTAATCCTTTTCATCACATCACAGTCAAGTCTCTTAAAACCATCTTCTCTATCGCATGATGAATTGTCTCTATCTTCTGATGTTTCAAACATGAATTTTGACATGTCGAGGTCTTCAGATGATGATTCTAAAATATCTTGGCTAGGTTCAATGAATATTTCTGTGGGAACTTCTCAATGTGGTATGAACACCGCAGAAGTGCCTGATGTTGATTGCATATTGAGTTGTCATCATGAGTCCATCTCTGTTCCTCTTCGCAGTGAAGAAGCATATCTGCATCTTCCCATAGTTGTGAGTATAATGTGGAAGGAAAATTTGCTTCCATTATTTTGTGGGAGGAACTTCTTCTTATCTTCGTTTTCTGATATCCAGACTTCAAAATATGATCGGTTTTCTTTGGTAAACAATCTTGCTTCTGCGGTGAGCTTTGCAAAGTCGAATCTAAGGGAAGGGAAGCGACTTCTGGGGAAGAAGAAGTTGAAAGAAGCTAGAAACATGGGTTCCTCAGTTGGAAAAGAGAGATCTATAGCCATAATTTTCAGATATAGTGATTGGATTGATGTGGTTCTCATGAATGCAAGATATGTAACTGGTGATGCTGATGATGAATGCAGAAGGGTATTGCTGGAGCAAAACGGGCGAGAGGCAAGTACTGAGAATTCGGTAACACTATTCTTTATGCACTCATCATCGTTCATCTCAGGAGTTGCATTTTCTGTATACTTTTGTTGGGGGGTGACCATAGCAGCGTTCCCAACACCGCTTTTGCTGATTATTCCTGGAATGCTTTATGGCAAGTTCCTTATCTATCTCTCAAACAAATCACTTGGAGTGGTTCTTCCAGATCTCAAATACTTTACAGACGCATCTGTTGCAGCTTCACGCATATTTGAAGTGATTGATCGGATACCGTCCATTGATGTTGAAGACAAAAAAGGACTCGCGTTGCAACGCATAAGTTGGAAGCTAGAATTTGAGCATGTGAAATTCACATACCCTTCTCGTCCAGAAACACTACTTGTACTAAGAGATTTCAATCTCCCACTTCCTCAAGGTTATGAGACCAATGCTCATAACTTCATAAGGCAGCTTCCTCAAGGTTATGAGACCAAGGAGACTCCAATTCTGCGACAGTTTTGCTTGGAGTTGAAAGCAGGAACGAGTATTGGACTAGTTGGCAATAGTGGGTGTGGGAAATCAACAGTGATAGCTCTGATTCAAGGGTTTTACGAACCTGAAAGAGGACATGTCAAAGTGGATGGTGTGGACATAAGGGAATTATACAGCACTTGTAAGCCAAGAGCCAACATTCGTGACAACATCTTGTTTGGCAAGCAAAATGCATCAGAAAATGAAGTGGTCCAGGCTGCCAGGGCAGCAAGTGTTCCCGAGTTCATCTTGTAA 1755 0.4171 MVSLDWDCSLHLPLWVSETEKASIEKRLEEWTERLKESGADIASLLACLKKPLLPLWISQRTLWINEVPNHDSWDFIILVFASSSTGIIQRRTTSEFSWSYIPGAGMMKKVGQGVYLLILFITSQSSLLKPSSLSHDELSLSSDVSNMNFDMSRSSDDDSKISWLGSMNISVGTSQCGMNTAEVPDVDCILSCHHESISVPLRSEEAYLHLPIVVSIMWKENLLPLFCGRNFFLSSFSDIQTSKYDRFSLVNNLASAVSFAKSNLREGKRLLGKKKLKEARNMGSSVGKERSIAIIFRYSDWIDVVLMNARYVTGDADDECRRVLLEQNGREASTENSVTLFFMHSSSFISGVAFSVYFCWGVTIAAFPTPLLLIIPGMLYGKFLIYLSNKSLGVVLPDLKYFTDASVAASRIFEVIDRIPSIDVEDKKGLALQRISWKLEFEHVKFTYPSRPETLLVLRDFNLPLPQGYETNAHNFIRQLPQGYETKETPILRQFCLELKAGTSIGLVGNSGCGKSTVIALIQGFYEPERGHVKVDGVDIRELYSTCKPRANIRDNILFGKQNASENEVVQAARAASVPEFIL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1518 584 Pfam ABC transporter 495 564 IPR003439 GO:0005524
Lele06g1518 584 Gene3D ABC transporter type 1, transmembrane domain 385 429 IPR036640 GO:0005524|GO:0016020
Lele06g1518 584 PANTHER ABC TRANSPORTER B FAMILY 489 583 - -
Lele06g1518 584 Pfam Rit1 N-terminal domain 8 106 IPR033449 -
Lele06g1518 584 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 478 583 IPR027417 -
Lele06g1518 584 Gene3D - 488 544 IPR027417 -
Lele06g1518 584 Gene3D - 430 469 IPR027417 -
Lele06g1518 584 Coils Coil 21 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1518 Lele-ChrLele06 9973372 9983096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1518 384 584 Calmodulin-binding Proteins AT2G36910 31.776 3.39e-23 102