Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1510 ATGGGGAATAAAATTGCGCGCACAACGCAAGTTTCGGCTTCGGAGTACTATCTTCATGACCTGCCTTCCACCTACAATCTCGTCTTGAAGGAGGTTTTAGGTCGAGGCCGTTTCTTCAAGTCTATTCAGTGCAAGCATGACGAGGGTTTGCTTCTGGTCAAGGTGTATTTCAAGCGTGGTGACTTCATCGATCTAAGAGAGTACGAACGGCGTCTGAGTCAGATTAGAGACATTTTCCGTAGCATTGATCACCCTCACGTTTGGCCCTTTCAGTTTTGGCAAGAAACAGACAAAGCAGCATATCTCTTGAGGCAATATTTCTTCCATAATCTGCATGATCGACTTAGTACTCGACCTTTTCTCAGTCTTATTGAGAAGAAATGGTTGGCTTTTCAGTTGCTCCTAGCCGTGAAACAGAGCCATGAGAAGGGAGTATGCCATGGTGATATTAAGTGTGAGAATGTGCTGATTACATCCTGGAATTGGCTTTACCTTGCGGACTTTGCATCCTTCAAGCCCACTTACATTCCATATGATGATCCCTCAGATTTTTCTTTTTTCTTTGACACTGGTGGAAGAAGGCTCTGTTATCTAGCACCTGAGAGATTTTATGAACATGGAGGGGAGATGCAGGTGGTACAAGATGCTTCATTAAAGCCATCTATGGATATATTTGCAGTTGGGTGTGTAATCGCTGAACTTTTCCTTGAGGGACAACCACCCTTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGACACTATGATCCTAGCCAACATCTTGAGAAGATACCAGATCTTGGAGTCCGTAAAATGATATTGCACATGATTCAACTAGAACCAGAATCACGATTTTCTGCTGAAAGCTACCTGAAGGAATATGCAGCAGTTGTGTTCCCAACCTATTTCTCACCATTTTTGCATGATTTTTACCGCTGCTGGAGTCCCCTTCATTCAGATATGAAGGTTTTATTATGTCAAAGTGCTTTCCAGGAGATACTAAAACAAATGATGAACAGTAAATCATCTGAGGAGGTGGATGTTACTTCTGGTGAGCTTTTGGGAGAGGTTGGTAAAGAAAATGTCAATTTTATGACGGACTCCCTGATAAAGAGAGATGAGACGGGAAACGGCTTAATTCCTGATCACTATGAGCTTCTTGGTGATTTCAGCAGCCTAATGAGGGGTGCTAAGAATCATAATCATTTATCTGGTCCCCGGCATGTGATAGGAAATGCCCCCAATTCTACCCTTTCGGAGAATCTAAAAAATTTGCAATCTCCTGGTGAGCTTCTTCAAACTATCTCCAATACATTCCGAGGAAATGATCATCCCTTTCTGAAGAGCATTACAATGAATGATTTGAATTCATTGATGTCTGGTTATGATAGTCAATCAGATACTTTTGGAATGCCTTTCTTACCACTACCAAAGGATAGTATGAGATGTGAAGGTATGGTTTTGATTACTTCGTTGCTCTGCTCCTGCATTCGAAATATCAAGTTGCCTCACTTGAGGAGGGCAGCTGTGCTCTTGTTGAAGGCTTCTGCATTATATACTGATGATGAAGATCGTTTGCAGCGTGTTATCCCATATGTTATTGCAATGCTTTCTGATCCATCAGCAATTGTACGTTGTGCTGCTTTAGAGACTTTGTGTGATATTCTGCCCCTTGTCCGAGATTTTCCACCCAGTGATGCAAAGATATTTCCTGAATACATACTTCCAATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGTTATGCCAGTAATATCACTAAGCTGGCACTCACTGCTTATGGATTCTTGATACACACAATAAGTTTGAGTGAGGCAGGTGTACTTGATGAATTGAGTTCACCACAGAAGTCATTGATATCATTTAGTCAGACTAGTGGAAGATTGCGAAGGATAAATTGTGATGTGCAACTTTTGCAGCTGAGGAAATCAATTGCTGAGGTTGTCCAAGAACTTGTCATGGGTCCGAAACAAACACCAAATATTAGAAGAGCACTCCTTCAGGACATAGGGAAGTTGTGTTATTTCTTTGGTCAGAGGCATAGTAATGACTTTCTCTTACCCATTCTTCCCGCTTTCCTTAATGATCGGGATGAACAATTACGATCTGTGTTCTATGAGAAGATTGTATATGTCTGCTTTTTTGTGGGCCAAAGAAGTGTGGAAGAATATCTTTTACCTTACATCGAGCAGGCTTTAAGTGACACAACGGACGCTGTCATTGTCAGAGCCTTAGATTGTTTGACCATTCTTTGCAAAAGTGGTTTCTTCAGGAAGAGGATACTGCTTGAAATGATAGAGCGTGCATTTCCTTTACTATGTTATCCTAGTGAATGGGTGCGTAGATCAGTGGTCTCATTTATTGCTGCTAGCAGCAAGAGCTTGGGTGCAGTAGATTCTTATGTTTATCTTGCTCCTGTCATACGACCCTTCCTCTGCAGACAACCTGTATCACTAGCTTCTGTGAGGGCCCTTTTTTCGTGTTTAAAGCCTCCTGTCTCAAGACAGGTTTTCCAGGAAGTATTCGAGAACTCCAGGAGTTCAGACATGCTAGAAAGACAAAGAAAGATATGGTATAGTTCATCATCACAATATAAACTATGGGAAATGGATGTACTGAGAAAAGGAATAGATGAGTTGGATTCATTGAAGAGCTGCCCTGACAAGCAACAAGGTCCTGGGGGTCAAGAGTCTATTGACACTGGCTTCCAACAGCCAGGGCTAACTGATTGTGATGAGGCTGACACAAAGTTGAGAACTATGGGGACCTTTATGCATAATGATTGCAGTATGATGGGACATCGTGAACCCCAATTCTGGGAGAAGTTACAGTTCTCTGGATTGATGTCACCTCAGGTTAGTCCTAGCAGTCTGCCATATGAGAAGTCATCAAATGGCATACCTTTGTATTCTTTCAGTGTGGATAGGCGGGCAATGGGAATTCCTCCTGCAGCATCTGATTCTCCTCTACAAATGAATTCTCTAGGAATCAGTTCATCCTCCATGCCTTGGGTTAGTCCAGATAGCAAGTCATTTAATTTGGCTAGTTCAGTTCCAGCTCCAAAGTTTGTTTCAGGTTCTTTTAACATTAGCGGTGGATCCAAACAGTTCTATCGAGTGGTGCATGAACCAGATGGCAGGGAAAATGAGACAGCCTATATTAATAGTAAAATTCAAGATCTAGGATTATCCCCCGATAGCAAAGGTAGTTCAATCTCACTTGAAGATGCAACCAACCAAACTGATGCGTCAGGATTTCCATCCTTTTCTCAAACACCCATTCCTGATTCTGGTTGGAGGCCCCGTGGGGTTTTGATTGCACACCTCCAAGAGCACCGTTCATCTGTGAATGACATAGCAATTTCTACTGATCATAGCTTCTTTGTGAGCACATCTGACGACTCTACGGTCAAGGTATGGGATTCTAGGAAGCTGGAAAAGGATATCTCATTCAGGTCAAGGCTAACTTATCATTTGGATGGAAGCCGAGCGCTATGTGCAACAATGCTTCGGGGTTCTGCACAAGTAGTAGTTGGAGCATGTGATGGATTAATTCATATGTTTTCTGTTGATCATATCTCTAGGGGTCTAGGAAATGTTGTTGAGAAGTATCCTGGTGTTGCTGACATCACAAAGAAGGATATAAAGGAAGGCTCCATCCTCAACGTGGTGAACTACCCTGTGGATGCTTATACCATCATGTTTAGCACTCAGAACTGTGGTATTCATCTATGGGATACTAGGTCAAGTTCCAGTTCATGGACTCGAAAAGTTACTCCTGAGGAGGGCTATATGCCTTCTCTGGTAGTAGGGCCTTGTGGTAATTGGTTTATATCAGGGTCATCTAGGGGCGTGATTATTCTTTGGGATCTGAGATTTTTGATACCTGTGAACTCTTGGCAGTATTCCCTTGCTTGCCCTATAGAAGAGATGTGTCTCTTCCTTCCTCCTCCAAATGCCTCTTTATCTTCAACTGTGAGGCCCCTTGTTTATGTGGCTGCAGGTAGCAATGAAGTTTCTCTTTGGAATGCAGAGAATGGTAGCTGCCACCAGGTATTGAAAGTGACCAATTGTGACAGTGACGCAGAAAAGTCTGAACTGCCTTGGGCCTTGGCTAGACCTTCTAACAAGGGAACTTCTAAACCAGATTTGAGGCGAAATGTCAATCCTAAGTATAGAGTTGTTGAGCTAAATGAACCTGCTCCCCGTCTTCCTGGTATTCGTTCATTGCTTCCATTGCCCGGGGGTGATTTGCTGACCGGGGGTACTGACTTGAAGATACGTCGATGGGATCACTACAGCCCTGACAAAAGTTACTGTATATGTGGACCTGATTTGAAAGGAGTGGGGAATGATGATTTGTATGAAACAAAATCTAGTTTTGGCGTGCAAGTTGTACAGGAGACAAAGAGACGTCCGCTTTCAAACAAGTTGACAGCGAAGGCAGTTGTCACGGCTGCTGCCACTGATCCTGCAGGTTGTCACCGTGATTCTATCCTTTCTTTGGCTTCTGTTAAGTTAAACCAGAGACTCTTGTTATCAAGCAGTAGAGACGGTGCTATCAAGGACCTAACCCATTTAGTGGATGTTCAAGCTGCTCTTAATGCAATCTGGGATATCAAGGTCCCTTGA 4665 0.4294 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLLLVKVYFKRGDFIDLREYERRLSQIRDIFRSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSLIEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSWNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVVQDASLKPSMDIFAVGCVIAELFLEGQPPFELSQLLAYRRGHYDPSQHLEKIPDLGVRKMILHMIQLEPESRFSAESYLKEYAAVVFPTYFSPFLHDFYRCWSPLHSDMKVLLCQSAFQEILKQMMNSKSSEEVDVTSGELLGEVGKENVNFMTDSLIKRDETGNGLIPDHYELLGDFSSLMRGAKNHNHLSGPRHVIGNAPNSTLSENLKNLQSPGELLQTISNTFRGNDHPFLKSITMNDLNSLMSGYDSQSDTFGMPFLPLPKDSMRCEGMVLITSLLCSCIRNIKLPHLRRAAVLLLKASALYTDDEDRLQRVIPYVIAMLSDPSAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNITKLALTAYGFLIHTISLSEAGVLDELSSPQKSLISFSQTSGRLRRINCDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGQRHSNDFLLPILPAFLNDRDEQLRSVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDTTDAVIVRALDCLTILCKSGFFRKRILLEMIERAFPLLCYPSEWVRRSVVSFIAASSKSLGAVDSYVYLAPVIRPFLCRQPVSLASVRALFSCLKPPVSRQVFQEVFENSRSSDMLERQRKIWYSSSSQYKLWEMDVLRKGIDELDSLKSCPDKQQGPGGQESIDTGFQQPGLTDCDEADTKLRTMGTFMHNDCSMMGHREPQFWEKLQFSGLMSPQVSPSSLPYEKSSNGIPLYSFSVDRRAMGIPPAASDSPLQMNSLGISSSSMPWVSPDSKSFNLASSVPAPKFVSGSFNISGGSKQFYRVVHEPDGRENETAYINSKIQDLGLSPDSKGSSISLEDATNQTDASGFPSFSQTPIPDSGWRPRGVLIAHLQEHRSSVNDIAISTDHSFFVSTSDDSTVKVWDSRKLEKDISFRSRLTYHLDGSRALCATMLRGSAQVVVGACDGLIHMFSVDHISRGLGNVVEKYPGVADITKKDIKEGSILNVVNYPVDAYTIMFSTQNCGIHLWDTRSSSSSWTRKVTPEEGYMPSLVVGPCGNWFISGSSRGVIILWDLRFLIPVNSWQYSLACPIEEMCLFLPPPNASLSSTVRPLVYVAAGSNEVSLWNAENGSCHQVLKVTNCDSDAEKSELPWALARPSNKGTSKPDLRRNVNPKYRVVELNEPAPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDKSYCICGPDLKGVGNDDLYETKSSFGVQVVQETKRRPLSNKLTAKAVVTAAATDPAGCHRDSILSLASVKLNQRLLLSSSRDGAIKDLTHLVDVQAALNAIWDIKVP 1554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1510 1554 CDD STKc_Vps15 16 303 - -
Lele06g1510 1554 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1533 IPR045162 GO:0004674|GO:0016236|GO:0045324
Lele06g1510 1554 MobiDBLite consensus disorder prediction 900 916 - -
Lele06g1510 1554 SUPERFAMILY WD40 repeat-like 1117 1534 IPR036322 GO:0005515
Lele06g1510 1554 MobiDBLite consensus disorder prediction 1079 1108 - -
Lele06g1510 1554 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1510 1554 Gene3D Transferase(Phosphotransferase) domain 1 22 344 - -
Lele06g1510 1554 FunFam Phosphoinositide 3-kinase regulatory subunit 4 1096 1161 - -
Lele06g1510 1554 Gene3D - 479 614 IPR011989 -
Lele06g1510 1554 FunFam Protein kinase family protein / WD-40 repeat family protein 24 348 - -
Lele06g1510 1554 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1510 1554 ProSiteProfiles Trp-Asp (WD) repeats profile. 1120 1152 IPR001680 GO:0005515
Lele06g1510 1554 ProSiteProfiles HEAT repeat profile. 697 735 IPR021133 -
Lele06g1510 1554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lele06g1510 1554 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1120 1152 - -
Lele06g1510 1554 SUPERFAMILY ARM repeat 317 823 IPR016024 -
Lele06g1510 1554 SMART WD40_4 1408 1442 IPR001680 GO:0005515
Lele06g1510 1554 SMART WD40_4 1113 1152 IPR001680 GO:0005515
Lele06g1510 1554 SMART WD40_4 1262 1301 IPR001680 GO:0005515
Lele06g1510 1554 SMART WD40_4 1161 1200 IPR001680 GO:0005515
Lele06g1510 1554 MobiDBLite consensus disorder prediction 1079 1106 - -
Lele06g1510 1554 FunFam Protein kinase family protein / WD-40 repeat family protein 625 835 - -
Lele06g1510 1554 Gene3D - 1326 1553 IPR015943 GO:0005515
Lele06g1510 1554 Pfam HEAT repeat 529 557 IPR000357 GO:0005515
Lele06g1510 1554 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1510 1554 Gene3D - 1161 1323 IPR015943 GO:0005515
Lele06g1510 1554 Gene3D - 615 841 IPR011989 -
Lele06g1510 1554 SUPERFAMILY Protein kinase-like (PK-like) 26 326 IPR011009 -
Lele06g1510 1554 MobiDBLite consensus disorder prediction 895 922 - -
Lele06g1510 1554 Gene3D - 1108 1158 IPR015943 GO:0005515
Lele06g1510 1554 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 475 614 - -
Lele06g1510 1554 Pfam WD domain, G-beta repeat 1116 1152 IPR001680 GO:0005515
Lele06g1510 1554 ProSiteProfiles HEAT repeat profile. 529 561 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1510 Lele-ChrLele06 9878772 9886373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1510 31 324 AGC Kinase Gene Family AT3G08730 24.847 1.29e-12 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Lele06g1510 Pkinase 1.4e-20 CL0016