Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1502 ATGCTCCGCTTCGTAGTCCCCTCATCCTTTCATTCGGAATACTCTACTGACTGGTTTTGGAATTCGCTGTCTGGGATGAAGATTGAGCAATTGGACGATGTGGATTTCAGTAGGGACGAAGGGAGTAATGAGAATCAGATTGTAAGGGTTGACGCAAAGAGGGCGTTAGTTGGAGCAGGGGCTCGGATCCTGTTTTACCCGACGCTTTTGTATAATGTACTTCGGAACAAGATTGAAGCCGAGTTCAGGTGGTGGGATCAAGTCGATGAGTTTTTATTGTTGGGTGCTGTTCCATTCCCTAAAGATGTTCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTGAATGAACCTTATGAAACGTTGGTTCCATCATCATTGTACCATGCTCATGAGATTGATCATTTAGTGATTCCTACAAGGGATTATCTCTTTGCCCCTTCACTAGAGGATATTAGTCGTGCTGTGCAATTCATTCATCAAAATGCATGTTGCGGTAAAACTACTTATGTTCATTGTAAAGCCGGTCGAGGAAGGAGCACAACGATTGTTCTTTGTTATTTGGTTGAATATAAGCACATGACACCTGCAACTGCCCTGGATTATGTGCGGTCTCGCAGACCTAGGGTGCTGCTAGCACCATCGCAGTGGAAGGCTGTTCAAAACTATAGCAAGTGTCGACCTTCTCCTTGTAATGCCAGGCCTACTCCTACTCCTACGCCATACTCTCCTTCTAGGGATGCAGTTCTCATAACCCAAGCTGATCTTGAGGGCTATCATAACGCATGCGATGCTGGTGTGCAGTTTGCCATCGTTACTAAAGTGCCAAAGGCCAAGCCCATGATAGCAAGATTATCTTGCCTGTTTGCGTCCCTTAAAGTTTCTGGCAGCAGTGTCCCAGCAATTAGGCGGTTGCCAATTTCTGAGGCACGTGCTTGCTAA 948 0.461 MLRFVVPSSFHSEYSTDWFWNSLSGMKIEQLDDVDFSRDEGSNENQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYHAHEIDHLVIPTRDYLFAPSLEDISRAVQFIHQNACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPATALDYVRSRRPRVLLAPSQWKAVQNYSKCRPSPCNARPTPTPTPYSPSRDAVLITQADLEGYHNACDAGVQFAIVTKVPKAKPMIARLSCLFASLKVSGSSVPAIRRLPISEARAC 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1502 315 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 26 293 - -
Lele06g1502 315 Pfam Dual specificity phosphatase, catalytic domain 106 226 IPR000340 GO:0008138|GO:0016311
Lele06g1502 315 ProSitePatterns Tyrosine specific protein phosphatases active site. 173 183 IPR016130 GO:0016311|GO:0016791
Lele06g1502 315 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 152 220 IPR000387 GO:0016311|GO:0016791
Lele06g1502 315 SMART dsp_5 87 228 IPR020422 GO:0006470|GO:0008138
Lele06g1502 315 FunFam Dual specificity phosphatase domain protein 84 231 - -
Lele06g1502 315 CDD PTPMT1 84 227 IPR044596 GO:0004721
Lele06g1502 315 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 78 226 IPR029021 -
Lele06g1502 315 Gene3D Protein tyrosine phosphatase superfamily 84 229 IPR029021 -
Lele06g1502 315 ProSiteProfiles Dual specificity protein phosphatase domain profile. 84 231 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1502 Lele-ChrLele06 9835980 9838292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1502 26 295 Protein tyrosine phosphatase (PTP) family AT2G35680 50.949 7.26e-100 295