Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1501 ATGGACAAGATGAGCAATTTGAGCTCTGTAAACAGTTGTGATCTGATAGATGCGAAGCTTGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGCCCTGGTTGCGGACACAAGTTTGAAACCAAACCGGACTGGTTAGGTCTTCCGGCTGGCGTGAAGTTTGATCCAACGGACCAAGAACTAATCGAACACCTTGAAGCCAAAGTGGAGTCCAAGAACATGACATCTCACCCTTTGATCGATGAGTTCATTCCTACAATTGAAGGAGAAGACGGAATCTGTTATACCCATCCTGAGAAACTCCCAGGAGTAACAAGAGACGGGTTGAGTAGGCACTTCTTTCACAGGCCGTCGAAGGCTTACACGACCGGAACAAGAAAGAGGAGAAAAATACAGAATGAAAGCGAGATGCAAGGCGGAGAAACGAGGTGGCACAAGACCGGGAAGACGAGGCCGGTGATGGCGAACGGAAAGCAAAAGGGCTGCAAGAAGATTCTAGTGCTCTACACCAACTTCGGCAAGAACCGGAAACCCGAGAAGACCAACTGGGTCATGCATCAGTACCACCTCGGCCAGCACGAGGAGGAGAAAGAAGGAGAGCTCGTCGTCTCCAAGATTTTCTACCAGACACAGCCCCGACAGTGTAATTGGTCCGATCGGAGCGCCGCCACAACCGGAGAACCCAGCGCCGACTTCGTTAATGCCAATAATAGTAGAAGAGACAGTGGCAGTGGCAGTTGCTCTTCTTCTAAGGAGATCAACAACGTTGTTGTTACAGCTCACAGAGATGATCAGATGTCGGCGGTCGTCGGGGTTGTCCCTCCCATGTCATCTTACGTTCATCATCGTCATCATGCTTTGGATATTCAACAACATCTGAAACCCGACCATTTTGGGTTCATTCCGTTCAGGAAAAGCTTCGACGAGCAACAGCAACAGCAACATCATAAACTAGGAGGAAGCTCTGCGTCTGGTCTGGAGGAACTCATAATGGGATGCACTTCAACAACTGATATTAAAGCGGAATCATCCGTCTCCGTCACAAACCTGCAAGAAGCCGAATGGCTCAAGTACTCCTACTGGCCCGACCCGGACAACCCGGATCATCACGGGTAA 1113 0.4978 MDKMSNLSSVNSCDLIDAKLEEHQLCGSKQCPGCGHKFETKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMTSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNESEMQGGETRWHKTGKTRPVMANGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSAATTGEPSADFVNANNSRRDSGSGSCSSSKEINNVVVTAHRDDQMSAVVGVVPPMSSYVHHRHHALDIQQHLKPDHFGFIPFRKSFDEQQQQQHHKLGGSSASGLEELIMGCTSTTDIKAESSVSVTNLQEAEWLKYSYWPDPDNPDHHG 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1501 370 SUPERFAMILY NAC domain 42 208 IPR036093 GO:0003677|GO:0006355
Lele06g1501 370 MobiDBLite consensus disorder prediction 127 147 - -
Lele06g1501 370 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Lele06g1501 370 MobiDBLite consensus disorder prediction 216 249 - -
Lele06g1501 370 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Lele06g1501 370 MobiDBLite consensus disorder prediction 127 154 - -
Lele06g1501 370 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Lele06g1501 370 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 10 333 IPR044799 GO:0003700
Lele06g1501 370 FunFam NAC domain-containing protein 73 56 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1501 Lele-ChrLele06 9827737 9831408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1501 13 367 NAC Transcription Factor Family AT5G56620 54.034 4.22e-129 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele06g1501 NAM 1.6e-24 No_clan