Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1492 ATGGGAAGAGCTCCCTGTTGCGACAAAGCTAACGTGAAAAGAGGACCATGGTCTCCTGAAGAAGATGCCACCCTCAAGAACTACCTCCACAAACATGGCACTGGTGGCAATTGGATCGCTCTCCCAAAAAAAGCTGGTCTTAAGCGTTGTGGGAAGAGCTGTCGTCTGAGATGGCTCAACTATCTTAGGCCTCATATAAGGCTCGGAGGTTTTACTGACGACGAAGACCAAATTATCTGCACTCTCTATGCTACCCTCGGAAGCAGGCAAGTCCATATATATATATACATATGCCATTCTAACCAACAGTTACTTTTTTTCCCAGCAGTTTCTGTTTCTTACTACAGTTGCGTTCTACTCTCTGTGAATATGTTCTGTTTTTCTGCCATTAGGTGGTCTCTTATAGCTGCTCAATTGCCTGGAAGAACGGACAATGATGTGAAAAACCACTGGAATACAAAGTTGAAGAAGAAGTTTCTTGAGGGAAAAAGTTATAATGGGACGACCATCAGCAGCAACATGAACGAGGGCAATAGTTATGTACCGTTCTTATCGTTTTCCCCTCAAACACCTCAAGGCGATGCCTTTCTGGTAGGTCACAAGGAGTCTGCAGACTATTTTGAGCCTTGTGTTCTGGAGTTGGAGCAAAATAATACAGCTCCATTTTCGGGACCAAAACCTCTGGAATCTCAAGTTTCAGAAGTTGGAAGCGGCGTGATGATCAGTGAAAGCTGCAGTATACCATGTTCTATGCAAGTTTCATCTTCTGCAGGTTGTTTGGCAGAGAAGAACGACCATACCAATTGGGTTGGATTTAAGCATGATGATCATCAATATGAAGCAAGTGTGCCTGATCTTGTGTATGATGATGTCTTCAATGGATTTGCTTCCTACGACCAGAGTCTCATCAACGAATGCTTCCCAAATTAA 930 0.4355 MGRAPCCDKANVKRGPWSPEEDATLKNYLHKHGTGGNWIALPKKAGLKRCGKSCRLRWLNYLRPHIRLGGFTDDEDQIICTLYATLGSRQVHIYIYICHSNQQLLFFPAVSVSYYSCVLLSVNMFCFSAIRWSLIAAQLPGRTDNDVKNHWNTKLKKKFLEGKSYNGTTISSNMNEGNSYVPFLSFSPQTPQGDAFLVGHKESADYFEPCVLELEQNNTAPFSGPKPLESQVSEVGSGVMISESCSIPCSMQVSSSAGCLAEKNDHTNWVGFKHDDHQYEASVPDLVYDDVFNGFASYDQSLINECFPN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1492 309 CDD SANT 16 62 IPR001005 -
Lele06g1492 309 SUPERFAMILY Homeodomain-like 14 156 IPR009057 -
Lele06g1492 309 CDD SANT 130 155 IPR001005 -
Lele06g1492 309 FunFam Transcription factor RAX3 7 68 - -
Lele06g1492 309 Pfam Myb-like DNA-binding domain 131 153 IPR001005 -
Lele06g1492 309 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele06g1492 309 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele06g1492 309 Gene3D - 70 158 - -
Lele06g1492 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Lele06g1492 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 159 IPR017930 -
Lele06g1492 309 SMART sant 13 64 IPR001005 -
Lele06g1492 309 SMART sant 67 157 IPR001005 -
Lele06g1492 309 PANTHER OS09G0431300 PROTEIN 1 178 - -
Lele06g1492 309 Gene3D - 7 67 - -
Lele06g1492 309 ProSiteProfiles Myb-like domain profile. 63 155 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1492 Lele-ChrLele06 9752496 9753503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1492 1 160 MYB Transcription Factor Family AT5G65790 58.125 1.11e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g1492 Myb_DNA-binding 2.2e-14 CL0123