Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1485 ATGTCAGCTAGATGCATAATGTCTATATCTACATATCTTACTGGTCGGAATTCGGATTCTCTTCTTCTTCTGGATTGTGGACTGTATACTTGGCTTGGCGGAATACGAGAGAAAGGATTAGGGATGGGAAGGAGAATTCTGAATGACGCACTGAGGACTATGGTGAATGCAGAGAGGAGAGGGAAAGCAATAGTGGAGTTGAAACCCATTTCCGCTGTCATATCCTCCTTTCTCAGGATCATGAAAGACCGAGGCTATGTCAAGGATTTTGAAGTCTTTGATCCTCATAGAGTGGGAAGGATAACAGTTCAACTTCAAGGAAGGATTAAGGATTGCAGAGCCCTTACATACCGACAAGATATCAAGGCAATTGACATAGAAAAATACAGATTGAAAACTCTTCCAACACATCAGTGGGGTTATGTTGTGATCTCAACCCCTGAAGGCGTTCTGGATCATGAGGAGGCCATTCGGCGGAAAGTAGGTGGTCAAGTTCTTGGTTACTTTCACTAG 513 0.4347 MSARCIMSISTYLTGRNSDSLLLLDCGLYTWLGGIREKGLGMGRRILNDALRTMVNAERRGKAIVELKPISAVISSFLRIMKDRGYVKDFEVFDPHRVGRITVQLQGRIKDCRALTYRQDIKAIDIEKYRLKTLPTHQWGYVVISTPEGVLDHEEAIRRKVGGQVLGYFH 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1485 170 SUPERFAMILY Ribosomal protein S8 44 169 IPR035987 GO:0003735|GO:0005840|GO:0006412
Lele06g1485 170 Gene3D - 110 170 - -
Lele06g1485 170 ProSitePatterns Ribosomal protein S8 signature. 140 157 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele06g1485 170 Gene3D - 42 109 - -
Lele06g1485 170 FunFam 40S ribosomal protein S15a 42 109 - -
Lele06g1485 170 Pfam Ribosomal protein S8 47 168 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele06g1485 170 PANTHER 40S RIBOSOMAL PROTEIN S15A 42 169 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1485 Lele-ChrLele06 9697997 9699717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1485 42 170 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 77.519 9.51e-76 221