Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1475 ATGGACTTAACCTCCCCCGCAATTAACAACATCGCCGCCTCCAATACTACCGCTACTAAATCCCCAGAACCAGACAGCGAAACTCCGATCCCGTTCCAACCCGCCCCCGCTAAGTTCTTGTCCTTCTCCAACGGCGTCCTGAAGCGCCATCAGCCCCACCACAAACATCCCGTGCAGGTCACCTACAAAGAATGCTTGAAAAACCATGCAGCCAGCTTGGGAGGCCACGCCCTCGACGGTTGTGGCGAGTTCATGCCCTCTCCGAATGCCAATTCTGCCGACCCCAGCTCCATTAAATGCGCCGCCTGCGGCTGCCACCGCAATTTCCATCGCCGTGAGCCCGAGGAGCCCATCTCCACCGCCACCCACGTCATCGAGTATCAGCCCCACCATCGGCACCACCCTCCGCCGCCTCCGCCGTTCCAAGCCCCAAATCGGAGCCCCAATTCAGCTTCCCCGCCTCCGATCTCATCTTCCTACTACCCCTCCGCTCCCCACATGCTCCTGGCTCTCTCTGCTGGTTTGTCGGCCCATCCGGAGAGCACGGCCGCTCCGGCAAATATCTTGGGGACGCCGACTTTGAATTCTAGGAAGCGGTTCAGGACCAAGTTCACACAAGAGCAGAAGGATAAAATGTACCAGTTCGCTGAGAGAGTGGGGTGGAAGATGCAGAAGGGAGACGACGAATTGGTGCAAGAGTTCTGCCACGATGTCGGGGTTGATAGAAGCGTTTTGAAGGTTTGGATGCACAATAACAAGAACACTTTGGGGAAGAAAGATGCCATGAATGGGAATAGAAACGTTCTTGAGCTAGACCAAAACGACAATCACGACAATGAAATCATTGGCAACAGTAACACCACCACTACCACCAACAACAACAACAACAACGGCAGCACCCACCAGGATCCGAATCATCACTACCAGAACGATAGTGGGGCAAACGCCGTTACTAATGGGTCGTCTTCGTCTTCTTAA 978 0.5481 MDLTSPAINNIAASNTTATKSPEPDSETPIPFQPAPAKFLSFSNGVLKRHQPHHKHPVQVTYKECLKNHAASLGGHALDGCGEFMPSPNANSADPSSIKCAACGCHRNFHRREPEEPISTATHVIEYQPHHRHHPPPPPPFQAPNRSPNSASPPPISSSYYPSAPHMLLALSAGLSAHPESTAAPANILGTPTLNSRKRFRTKFTQEQKDKMYQFAERVGWKMQKGDDELVQEFCHDVGVDRSVLKVWMHNNKNTLGKKDAMNGNRNVLELDQNDNHDNEIIGNSNTTTTTNNNNNNGSTHQDPNHHYQNDSGANAVTNGSSSSS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1475 325 MobiDBLite consensus disorder prediction 274 325 - -
Lele06g1475 325 MobiDBLite consensus disorder prediction 134 151 - -
Lele06g1475 325 MobiDBLite consensus disorder prediction 1 35 - -
Lele06g1475 325 Pfam ZF-HD protein dimerisation region 60 114 IPR006456 -
Lele06g1475 325 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 44 256 - -
Lele06g1475 325 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 113 IPR006456 -
Lele06g1475 325 MobiDBLite consensus disorder prediction 128 159 - -
Lele06g1475 325 Gene3D - 191 258 - -
Lele06g1475 325 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 61 113 IPR006456 -
Lele06g1475 325 MobiDBLite consensus disorder prediction 278 325 - -
Lele06g1475 325 FunFam Zinc-finger homeodomain protein 2 187 258 - -
Lele06g1475 325 SUPERFAMILY Homeodomain-like 192 258 IPR009057 -
Lele06g1475 325 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 197 254 IPR006455 -
Lele06g1475 325 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1475 Lele-ChrLele06 9634235 9635212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1475 10 290 ZF-HD Transcription Factor Family AT5G15210 50.345 8.18e-76 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele06g1475 ZF-HD_dimer 1.2e-28 No_clan