Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1474 ATGAAGCGCCAGGTATTAGTAGTGAGAAAAACTGAAGGTGGTGGAAGAGGTTCAAGCAGTAGGAGTGTGAGGTATGGAGAGTGTCAGAAGAATCATGCGGCTAATTCCGGTGGATACGCCGTAGACGGTTGCCGGGAATTCATAGCCAGCAGCGGGGAGGAAGCAAATTCTGCTCTTACATGTGCTGCCTGTGGCTGCCACAGAAACTTCCACAAGAGATTGGTGGACACTTCTACTACAGATGAGTCCTCTTCACTTCCTTCAAATTAA 270 0.4852 MKRQVLVVRKTEGGGRGSSSRSVRYGECQKNHAANSGGYAVDGCREFIASSGEEANSALTCAACGCHRNFHKRLVDTSTTDESSSLPSN 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1474 89 MobiDBLite consensus disorder prediction 1 24 - -
Lele06g1474 89 Pfam ZF-HD protein dimerisation region 23 74 IPR006456 -
Lele06g1474 89 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 24 73 IPR006456 -
Lele06g1474 89 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 74 IPR006456 -
Lele06g1474 89 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 19 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1474 Lele-ChrLele06 9624360 9624629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1474 2 89 Zinc finger-homeobox gene family AT1G18835 61.364 8.50e-31 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele06g1474 ZF-HD_dimer 9.5e-28 No_clan