Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1467 ATGTCGAATGCCGCCTGTCTTGTGCAATGGCTAAATATTTATCTTCCCCCATTTAAGGGGCCTTCACGACTACTTCTGAACTCTGACTCTGAATCTGAATCATTTTCCAATCCTTTCTCACTTTGGAGGACTGTGTTTTGTGGTGTGGTAATGGCGGAAGCTGCTGCAGAGCCCAAAGCAGTGGCGGAGGCAGAGAAGAAGAAGGAGCAGAGTTTACCCTTTTATCAGCTCTTCTCTTTCGCCGATAAGTATGACTGGTTGCTCATGATCTCTGGCAGCTTGGGAGCTGTCGTTCATGGCTCCTCCATGCCTGTTTTCTTCCTTCTTTTTGGTGAAATGGTTAATGGGTTTGGCAAGAACCAGATGGATTTGAAGAAAATGACAGACGAAGTATCAAAGTATGCTCTGTATTTTGTGTACCTGGGTCTTGTCGTTTGCGCATCATCGTATGCGGAAATTGCTTGTTGGATGTATACCGGGGAGAGGCAAGTGAGCACGTTGAGGAAGAAGTATTTGCAGGCAGTGCTTAAACAGGATGTTGGGTTCTTCGACACAGACGCTAGAACAGGGGATATTGTTTTCAGTGTCTCCACTGATACTCTGCTTGTTCAAGATGCTATAAGCGAGAAGGTAGGGAACTTCATACACTATCTATCAACTTTTCTGGCGGGTCTAGTGGTTGGTTTTGTGTCGGCATGGAGACTGGCTCTTCTGAGTGTGGCGGTGATTCCGGGCATTGCTTTCGCCGGCGGCTTGTACGCTTATACACTCACTGGCCTCACTTCAAAGAGTCGTCAATCCTATGCCAATGCCGGCATAATCGCCGAGCAGGCAATTGCTCAAGTTCGAACTGTTTACTCATACGTTGGAGAGAGCAAGGCCCTTGATTCTTATTCTGATGCTATACAAAACACACTGAAGCTTGGATATAAGGCTGGAATGGCGAAAGGTTTGGGTTTAGGATGCACATATGGGATAGCGTGTATGTCTTGGGCTTTAGTCTTTTGGTATGCCGGTGTCTTCATCAGGAATGGACAGACCGACGGAGGCAAGGCTTTTACGGCCATTTTCTCCGCCATTGTTGGTGGCATGAGTTTGGGACAGTCGTTTTCAAATTTAGGAGCGTTCAGTAAAGGTAAAGCTGCTGGATACAAGTTGATGGAAATTATCAATCAGAGACCTTCCATAGTGGAAGGTGCATCAGACGGAAAGTGCTTGCCTGAGGTTCATGGGAATATCGAATTCAAAGATGTCACTTTCAGCTATCCATCTAGGCCTGACGTTATTATCTTTCGCAATTTCTCTATCTTTTTTCCTGCGGGGAAAACAGTGGCCGTTGTTGGCGGAAGTGGGTCGGGAAAGAGTACTGTGGTTTCACTGATAGAGAGGTTCTATGATCCTAACGAAGGGCATGTTTTACTGGATAATGTAGACATAAAGACACTTGAGTTAAAATGGTTACGTAGTCAAATTGGGCTGGTGAATCAAGAACCTGCACTCTTTGCAACTAGCATTCTTGAGAATATACTTTACGGAAAACCTGATGCAACCATGGCTGAAGTTGAAGCTGCTGCTTCTGCTGCAAACGCTCATAGCTTCATTACCTTGCTTCCAAATGGCTATAACACTCAGGTGGGAGAGCGAGGAGTTCAATTGTCAGGTGGTCAAAAACAGAGGATTGCAATAGCGAGAGCAATGTTGAAGAATCCAAAGATTCTTCTTTTAGATGAAGCTACCAGTGCTCTTGATGCAGGCTCTGAAAGTATTGTGCAAGAAGCACTAGACCGGCTTATGGTTGGACGTACGACTGTAGTTGTCGCCCACCGTCTGTCCACCATAAGAAACGTGGACTCCATTGCCGTTATCCAACAAGGACAAGTAGTTGAGACAGGGACGCATGAAGAGCTGATTGCCAAGGCAGGGACTTATTCGTCACTGATTAGATTCCAAGAAATGGTCGGAAACAGAGACTTGTCCAACCCATCAACTCGCCGGACTCGTTCATCTCGGTTGAGCCACTCGCTTTCCACCAAGTCTTTGAGCCTCCGGTCCGGGAGCTTGAGGAATCTGAGCTACCAGTACAGCACCGGAGCAGATGGTCGGATTGAGATGGTATCAAGTGCAGAAACGGACAAGAAAAATCCGGCTCCTCAGGGTTATTTCTTCCGACTGCTCAAGTTAAATGCCCCAGAATGGCCATACTCAATCATGGGAGCTGTAGGCTCTGTTCTCTCTGGGTTCATCGGCCCCACATTTGCCATCGTGATGAGCAACATGATCGAGGTATTTTACTACAAGAACTACGCATCCATGGAGAAAAAGACCAAGGAGTTTGTTTTCATATACATCGGAGCTGGTCTTTATGCCGTGGGGGCGTATTTGATACAACATTACTTCTTCAGTATCATGGGAGAAAATCTCACCACAAGGGTTCGAAGAATGATGATTGCCGCAATATTAAGGAATGAAGTTGGATGGTTCGATGAGGAGGAGCACAATTCTAGCTTGGTTTCAGCGAAGCTAGCGACGGATGCTGCGGATGTGAAGTCGGCGATTGCTGAGAGGATCTCAGTGATTCTGCAGAACATGACGTCTCTGTTAACTTCATTTATAGTAGCTTTTATCGTGGAATGGAGGGTTTCTTTGCTCATCCTTGCAACCTTCCCTGTACTTGTCCTGGCTAATTTTGCCCAGCAACTATCTCTGAAAGGGTTTGCGGGAGACACAGCGAAGGCACATGCAAAGACGAGTATGATCGCCGGAGAAGGAGTAAGCAACATCAGAACAGTCGCCGCATTCAACGCTCAGAACAAGATCTTATCTCTCTTCTGCCACGAGCTTCGTGTCCCACAGCGCCGAAGCCTCCGTCGCAGCCAAACTTCCGGCCTCCTCTTCGGTCTCTCCCAGCTCGCTCTTTACGCCTCCGAAGCTCTCATTCTTTGGCTTGTTGGGGTTGATAAGCGTGTTTGGGTTATTTCCTTTCTCGTTTCTTTCCTAGATGTAGATAATGTGGGATATGGGGGCTTGTAG 3030 0.469 MSNAACLVQWLNIYLPPFKGPSRLLLNSDSESESFSNPFSLWRTVFCGVVMAEAAAEPKAVAEAEKKKEQSLPFYQLFSFADKYDWLLMISGSLGAVVHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTDEVSKYALYFVYLGLVVCASSYAEIACWMYTGERQVSTLRKKYLQAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRQSYANAGIIAEQAIAQVRTVYSYVGESKALDSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIINQRPSIVEGASDGKCLPEVHGNIEFKDVTFSYPSRPDVIIFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGHVLLDNVDIKTLELKWLRSQIGLVNQEPALFATSILENILYGKPDATMAEVEAAASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIAKAGTYSSLIRFQEMVGNRDLSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMVSSAETDKKNPAPQGYFFRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYKNYASMEKKTKEFVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMIAAILRNEVGWFDEEEHNSSLVSAKLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPVLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKILSLFCHELRVPQRRSLRRSQTSGLLFGLSQLALYASEALILWLVGVDKRVWVISFLVSFLDVDNVGYGGL 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1467 1009 FunFam ABC transporter B family member 1 76 407 - -
Lele06g1467 1009 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 736 985 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g1467 1009 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 413 649 IPR003439 GO:0005524
Lele06g1467 1009 SUPERFAMILY ABC transporter transmembrane region 717 984 IPR036640 GO:0005524|GO:0016020
Lele06g1467 1009 FunFam ABC transporter B family member 1 715 988 - -
Lele06g1467 1009 CDD ABC_6TM_Pgp_ABCB1_D2_like 725 981 - -
Lele06g1467 1009 PANTHER ABC TRANSPORTER B FAMILY 53 748 - -
Lele06g1467 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 404 650 IPR027417 -
Lele06g1467 1009 ProSitePatterns ABC transporters family signature. 552 566 IPR017871 GO:0005524|GO:0016887
Lele06g1467 1009 Gene3D ABC transporter type 1, transmembrane domain 136 982 IPR036640 GO:0005524|GO:0016020
Lele06g1467 1009 SUPERFAMILY ABC transporter transmembrane region 77 398 IPR036640 GO:0005524|GO:0016020
Lele06g1467 1009 Pfam ABC transporter 432 580 IPR003439 GO:0005524
Lele06g1467 1009 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 92 378 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g1467 1009 CDD ABC_MTABC3_MDL1_MDL2 413 650 - -
Lele06g1467 1009 FunFam ABC transporter B family member 19 403 651 - -
Lele06g1467 1009 SMART AAA_5 440 632 IPR003593 -
Lele06g1467 1009 CDD ABC_6TM_Pgp_ABCB1_D1_like 89 386 - -
Lele06g1467 1009 Gene3D - 411 674 IPR027417 -
Lele06g1467 1009 Pfam ABC transporter transmembrane region 94 363 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g1467 1009 Pfam ABC transporter transmembrane region 736 984 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g1467 1009 MobiDBLite consensus disorder prediction 657 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1467 Lele-ChrLele06 9566226 9573553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1467 711 984 Calmodulin-binding Proteins AT2G36910 25.267 1.54e-19 92.8