Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1465 ATGTTGAAGAGATCCATGTCGTTTTCAGGGATGGAGAACAAGCATGAAGATGAAGAGCTTTCCGATGATGGATCTCAGATGATGGGGGAGAAGAAGAAGAGACTGAACATGGAACAGGTGAAGGCACTGGAAAATAGCTTCGATTTAGGGAACAAGTTGGAGCCTGAACGCAAAATGCAGCTGGCCAAGGCTCTAGGCCTTCAGCCAAGGCAGATCGCTATCTGGTTCCAGAATAGGAGGGCCAGATGGAAAACCAAGCACCTCGAGAAGGAATATGAAGCTCTCAAGAGGAAGTTTGATGATCTCAAGGCCGATAACGATGCCCTTAAGTCTCATAACCACAAATTACACGCTGAGTTACAAGCTCTAAAGGGGAGAGATTGCTGTGAAGAAGGAGGAACTATCAACCTTATCAACCTTAAGAAAGAACCTGAGGTACGTTGGAGCAATGGGAGTACTGAGAATAGCTCGGATATTAACTTGGATCTCTCAAGATCACAATTTATGAACAGCACTGTAACTTCAATACAGAATGGTAAAAGCCTTCTTAAGCCCACCAGCATAACCCATCCCCTCCAATGCTCATCAAGGTCATCAGAACTTCAAGATGAAAGCTTCTCCAGCATGTTTCACGGCGGCACCGGTGTCCATGAGCACCAGAACTTCTGGCCCTGGCCAGAGCACCACCAGTTTCATTGA 699 0.4635 MLKRSMSFSGMENKHEDEELSDDGSQMMGEKKKRLNMEQVKALENSFDLGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKHLEKEYEALKRKFDDLKADNDALKSHNHKLHAELQALKGRDCCEEGGTINLINLKKEPEVRWSNGSTENSSDINLDLSRSQFMNSTVTSIQNGKSLLKPTSITHPLQCSSRSSELQDESFSSMFHGGTGVHEHQNFWPWPEHHQFH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1465 232 CDD homeodomain 31 87 IPR001356 GO:0003677
Lele06g1465 232 Gene3D - 23 98 - -
Lele06g1465 232 ProSiteProfiles 'Homeobox' domain profile. 26 86 IPR001356 GO:0003677
Lele06g1465 232 FunFam Homeobox-leucine zipper protein ATHB-13 22 90 - -
Lele06g1465 232 MobiDBLite consensus disorder prediction 1 32 - -
Lele06g1465 232 ProSitePatterns 'Homeobox' domain signature. 61 84 IPR017970 GO:0000981|GO:0006355
Lele06g1465 232 Coils Coil 78 112 - -
Lele06g1465 232 MobiDBLite consensus disorder prediction 9 32 - -
Lele06g1465 232 SMART HOX_1 29 90 IPR001356 GO:0003677
Lele06g1465 232 Pfam Homeodomain 31 84 IPR001356 GO:0003677
Lele06g1465 232 PRINTS Lambda-repressor HTH signature 57 66 IPR000047 GO:0003677
Lele06g1465 232 PRINTS Lambda-repressor HTH signature 66 82 IPR000047 GO:0003677
Lele06g1465 232 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 5 214 IPR045224 GO:0003700
Lele06g1465 232 Pfam Homeobox associated leucine zipper 86 125 IPR003106 GO:0006355|GO:0043565
Lele06g1465 232 SUPERFAMILY Homeodomain-like 26 87 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1465 Lele-ChrLele06 9546255 9547614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1465 1 225 Homeobox Transcription Factor Family AT3G01220 51.709 3.11e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele06g1465 Homeodomain 6.4e-16 CL0123