Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1464 ATGGCCGATGCTTTGGACCTGGCAAAATCGAAGGGAAAGAAGGCAAATGACGTCGAAGCTAGGCGCCCGAAATGGTTGCTGAAACTGAGTCTCGTCGTCGGAAGCTGCTTATTTTTGAAGAAGTCCAAAGAGGACGACTACGGCTCTGCAGAAAGCGATCACTCTACCAAGAAATCCGATCCGGCAGCTGCAGCACCATCCCCCTTGTCGCACTTCGAGGAAATAAAATTTGCTTCCAATCTTAGAAGGTTTTCTTTTGATGAGCTGAAGGAAATCACTCATAATTTTAAACCCAACAGTATTCTTGGCCAAGGGGGTTTTGGTTGCGTTTTTAAAGGTCTGACCAAACAAGCAAGATCAACTGGTTCGACCATTCCAGTTGCAGTCAAGATTCTTAACATTGCAGGACTTCAAGGCCACAAAGAATGGCTTACAGAAATTAATTATCTGGGGGCACTTCAGCATCCGAATCTAGTTAAATTAATAGGTTACTGCATTGAGGAAGAGAAAAGGGTGCTGGTGTATGAGTTTATGCCTCGAGGAAGCTTGGACAACCACCTGTTTAGGAGGACTACGCCCCTTCCATGGAGGATGAGATTGAAAATTGTGATTGGTGCTGCGAAGGGCCTTGCGTTTCTGCATGAAGAAGCTGACAGAACAGTGATTTTCAGGGACTTCAAAACATCTAATATACTTCTGGATGCGGAATATAATGCAAAACTTTCTGATTTTGGACTTGCCAAAGATGGTCCTGAGGGTGATTCAACACATGTGTCTACTCGAGTGATGGGAACATTTGGGTATGCAGCTCCTGAGTATGTCATGACAGGACACCTGACTGTGAAGAGTGACGTGTACAGCTTCGGCGTGGTTCTGCTAGAATTGCTGACTGGGCGAAAGGCCATGGACAAGAACCGTCCAAGAGGTGAGCACAACCTGGTTGAATGGGCAAGGCACAGCTTTGAAGACAGAAGGAGATTCTACTCCTACAAGCTCATCGATCCTCGCCTTCAGGGTTATTTCTCCATGAAAGCTTCTCAGACAGCGTTCCAGTTGGCTGCTCGCTGCCTTTCCCGCCAACCCAAATCAAGACCCACCATGTCCGAGGTTGTCCACATCTTGGAGCCCTTGCCCGAACTAAACGATATGTATATCTTCTCCTCTTTCAAGTCCATGCTTCCTGATGGACCATCCCACCCTGGATCGTCCTCCTCCAGGAGCTTGCCAAACTCACCGTTTCGCCCACACTATCCGCTGCCGTTTCCGAGTCCAAAGGGAATTGTCCCGTGA 1290 0.4767 MADALDLAKSKGKKANDVEARRPKWLLKLSLVVGSCLFLKKSKEDDYGSAESDHSTKKSDPAAAAPSPLSHFEEIKFASNLRRFSFDELKEITHNFKPNSILGQGGFGCVFKGLTKQARSTGSTIPVAVKILNIAGLQGHKEWLTEINYLGALQHPNLVKLIGYCIEEEKRVLVYEFMPRGSLDNHLFRRTTPLPWRMRLKIVIGAAKGLAFLHEEADRTVIFRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDSTHVSTRVMGTFGYAAPEYVMTGHLTVKSDVYSFGVVLLELLTGRKAMDKNRPRGEHNLVEWARHSFEDRRRFYSYKLIDPRLQGYFSMKASQTAFQLAARCLSRQPKSRPTMSEVVHILEPLPELNDMYIFSSFKSMLPDGPSHPGSSSSRSLPNSPFRPHYPLPFPSPKGIVP 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1464 429 SUPERFAMILY Protein kinase-like (PK-like) 81 408 IPR011009 -
Lele06g1464 429 Gene3D Phosphorylase Kinase; domain 1 76 177 - -
Lele06g1464 429 FunFam Serine/threonine-protein kinase BIK1 64 177 - -
Lele06g1464 429 Pfam Protein tyrosine and serine/threonine kinase 100 374 IPR001245 GO:0004672|GO:0006468
Lele06g1464 429 MobiDBLite consensus disorder prediction 396 429 - -
Lele06g1464 429 ProSitePatterns Protein kinases ATP-binding region signature. 102 130 IPR017441 GO:0005524
Lele06g1464 429 Gene3D Transferase(Phosphotransferase) domain 1 178 387 - -
Lele06g1464 429 ProSiteProfiles Protein kinase domain profile. 96 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1464 429 MobiDBLite consensus disorder prediction 413 429 - -
Lele06g1464 429 FunFam Serine/threonine-protein kinase PBS1 178 387 - -
Lele06g1464 429 CDD STKc_IRAK 102 377 - -
Lele06g1464 429 PANTHER OS01G0588500 PROTEIN-RELATED 56 377 - -
Lele06g1464 429 MobiDBLite consensus disorder prediction 47 67 - -
Lele06g1464 429 MobiDBLite consensus disorder prediction 397 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1464 Lele-ChrLele06 9532533 9536358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1464 49 374 Glycoside Hydrolase AT3G07070 49.245 1.35e-102 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele06g1464 PK_Tyr_Ser-Thr 1.2e-49 CL0016