LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele06g1444	ATGGGATTTGGGAATAATGCAATTCAAGCTGGAAGTTTGGAAGTGGGCAAGTCAAATGGAAGGAAGAAGAAAGATGGTGCAGAGAAGCATAGTGGGTGTTGGGCTAAATTCAGTTGCATCGGAAGCTGCATACCTTCTAGATCAAAGATTGATAACTACTTAAGTGGTGGTCCAAGCGCCGCCCATAATGTGGAAAACAGATGTACAAATGAAAATACCAAAGATCGAACAGTTGCTCCTCCAGAGTCCTCCGCTACCACTAGTTATGCAGGAAGTGTACCCTCAACTCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTCACATTCAATGAACTCAAAATGGCTACTAGGAATTTCAGACCAGAGAGTCTTCTTGGCGAAGGAGGGTTTGGTTGTGTCTTCAAAGGTTGGGTTGAAGAGAATGGAACTGCACCTGTCAAACCGGGTACTGGCCTTACTGTTGCAGTGAAGACCCTCAACCATGATGGACTTCAGGGTCATAAAGAGTGGCTTGCTGAGCTGAATTACCTTGGTGATCTTGCCCACGCTAATCTGGTTAAATTGATTGGCTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAATTTATGCCGCGAGGAAGTTTAGAGAACCATCTCTTTAGAAGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGAGCTGCGAAAGGTCTTGCCTTTCTTCATGAAGAAGCTCAGAGGCCCATAATATATCGAGATTTCAAGACATCTAATATCCTATTAGATGCGGAATACAATGCCAAGCTTTCTGATTTCGGACTTGCCAAAGATGGTCCTGAGGTTGGAAAGACCCATGTATCAACAAGAGTTATGGGAACATATGGTTATGCAGCTCCAGAATATGTGATGACTGGACATTTGACATCAAAAAGTGATGTTTATAGTTTCGGGGTAGTGCTCCTTGAAATGCTTACTGGTCGGCGAGCAATTGATAAAAATAGACCAAATGGGGAACACAACCTGGTGGAATGGGCAAGACCTGCACTTGGAGACCGGAGGATGTTCTACCGGATAATTGATCCTCGTCTTGAAGGTCACTTCTCGGTTAAAGGTTCACAGAAAGCCGCCCAACTGGCTGCTCGATGCCTTAGCCGTGATCCAAAATCTAGACCCATGATGAGTCAAGTTGTTCAAATTCTTAAGCCTTTGCCAAACCTTAAGGATATGGCTATTTCATCTCAATACTTTCAGTTTACACGAGTAGATCGCACCATGTCGATGCCAAATCCCAAAAATGGTTCAAAAGCACAGCTAACATCTGTATCAAGGAAAGGTCAACCTGTAAGGATCTTGTCGAGCCCTAACGGGCCACGTGGTTCTCCATATCATCATTATTCCAAGTCACCAAAACCTAATGGGTGA	1434	0.4358	MGFGNNAIQAGSLEVGKSNGRKKKDGAEKHSGCWAKFSCIGSCIPSRSKIDNYLSGGPSAAHNVENRCTNENTKDRTVAPPESSATTSYAGSVPSTPKFSEELKVSSRLRKFTFNELKMATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNYLGDLAHANLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEVGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAIDKNRPNGEHNLVEWARPALGDRRMFYRIIDPRLEGHFSVKGSQKAAQLAARCLSRDPKSRPMMSQVVQILKPLPNLKDMAISSQYFQFTRVDRTMSMPNPKNGSKAQLTSVSRKGQPVRILSSPNGPRGSPYHHYSKSPKPNG	477

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele06g1444	477	CDD	STKc_IRAK	130	407	-	-
	Lele06g1444	477	Gene3D	Phosphorylase Kinase; domain 1	98	209	-	-
	Lele06g1444	477	Gene3D	Transferase(Phosphotransferase) domain 1	210	426	-	-
	Lele06g1444	477	MobiDBLite	consensus disorder prediction	64	97	-	-
	Lele06g1444	477	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	253	265	IPR008271	GO:0004672\|GO:0006468
	Lele06g1444	477	MobiDBLite	consensus disorder prediction	430	477	-	-
	Lele06g1444	477	PANTHER	OS01G0588500 PROTEIN-RELATED	79	407	-	-
	Lele06g1444	477	ProSitePatterns	Protein kinases ATP-binding region signature.	130	162	IPR017441	GO:0005524
	Lele06g1444	477	Pfam	Protein kinase domain	127	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele06g1444	477	MobiDBLite	consensus disorder prediction	430	453	-	-
	Lele06g1444	477	FunFam	Probable serine/threonine-protein kinase PBL8	210	424	-	-
	Lele06g1444	477	FunFam	Serine/threonine-protein kinase BIK1	92	209	-	-
	Lele06g1444	477	ProSiteProfiles	Protein kinase domain profile.	124	410	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele06g1444	477	SUPERFAMILY	Protein kinase-like (PK-like)	98	404	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele06g1444	Lele-ChrLele06	9434009	9438140	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele06g1444	110	420	Glycoside Hydrolase	AT3G07070	54.777	5.13e-113	338

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-2	Lele06g1444		Pkinase	1.9e-46	CL0016