Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1439 ATGGCGGGAAGGAGGAAACCTCTGGTACTCGATTCCACCAAATTGCTCATCAATTCTGTGCTCAGCTCGTCACAAGGTTGGGAAGCAAGCCCTGGAGCTCGGGACAAGCTCTTTGATGGCGGCTCTCCCAGGAATTTACAGTTACCTGTGGGGATTCTCCGACTCTCGGAGGATGGAAACGAGAGAACGGAACCTCAATCGGCCACTCTTGACGATTCTGCGTTGGTCGGCCTATCAACTTCGCTTTTGAGAAGGCTTTCTATAACTTCGGGTTCATTGGTGCTTGTCAAGAATGTTGAGATGAACATACAGAGAATTGCTCAGGCAGTTGCCCTAGATCCTCCTGGCAGCCATGAGTGCACGTCTGATGTTAAATTGCCCTCTCCCCGTATGATGCTTGTATTTCCTTCTTGTGCTTTCCCTCATGGTGACATGTTAGTTCACGAAGTTGCTTATGTATCTCCTCTCTTAGCTTTCAACCTCAATTTGCACATAACATGCTTAGAATCTATCCTACACCAAGGGGAAGAGGTATTAGCATCTTATTTCAATCCAAAAGTGGATGAGGAGGTTATTGCAAAAAGCACTGAGACTTCTTCCATTGATATAGAATTGGTACCTTTGGTTCAAGCTCCTAGGTGTGCATCACATCTAAGGGTTTCTTTTGTGAAGATACCAGAATGTGGTACACTTGAAACTCTTAGAGGGGGTTCACCTAGTGAATCAGAAGACCGCCAAAATATGATTGATTTAGCATTACAAAAACATTTTCAAGTGGATAGATATTTGGCAAAAGGAGATATTTTTGGCGTCAGCATAAATTGGAACTGCAATTCCATTGCATGTATTCCTTGCAACCGAAAATCACAAAAGAAAAATGGAAATCTAATCTATTTCAAGGTCATTGCTATGGAACCATCAGACGAACCAATTCTTCGTGTCAATCGAGCCTCAACTGCTCTGGTGCTTGGAGGGAGCTTCTCTTCTGCTCTTCCACCAGATTTGTTAATTGCTGGACCAGAAGAACCTGTGCCTTTACAAGGGGATACAGTAAAAATCTTGGCTTCAGTACTTACACCAGCTTTCTGTCCATCAGCACTTTCTTTAAAATTCAGAGTTTCAGTTCTATTGTATGGCTTAGCAGGTTGCGGAAAGCGGACTGTTGTTAGATATGTTGCTCGTCGATTGGGCCTGCATGTGGTGGAATATAATTGTCATGATATAACATTGTCAGAGAGGAACACATCTGTCGCACTAGTTCAAGCTTTTAAGACAGCTCAGAGATACTCACCAACTATACTTCTTCTCCGTCATTTTGAAGTTTTTCGAGACATGCAAGCCCTTGAGGGTCAAGTAAATGATCAAAGAGGCAATACATATGAAATCGCATCAATTATTAGGAAATTCACAGAGTCAACTCGTAAAGACAGTGGCATATACTCCCATGAGAAACCAAATGGTGAATTTGTTGAGAAGAGTGCTGAAAATACAAGTGGGCATCAGATCCTGTTGATTGCAGCTGCTGTTAGTTCAGAAGGTCTGCCTCCAAGTATCAGACGATGCTTCAGCCATGAAATAAAAATGGGGCCTTTGACTGAAGAGCAAAGGGCTGAAATGTTATCCCAGTCACTGCGAAGTGTCCTCTCTAATACTGATGGCGAGAGTTTTGTAAAAGAAATAGTTGGGCAGACATCTGGTTTCATGCCCAGAGACATGTGTGCTTTGATTGCTGATGTTGGTGCCAACATATTTCCCAGGAGTTTTGATGCTGTAGACAAAGCTAGGCCTAAGGATATTGATGGTTCTTCTAGTTCTGAAGTGATGCAGGAAAGCAACCGCTGGAAAATTTCACCAGAGGTTCAAGGCAAAGAACATTTGGCAAAAGCTTTGGAACGATCAAAGAAAAGAAATGCCGCTGCATTGGGTGCTCCAAAGGTTCCAGATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGACGTGAAAAAATCAATACTGGATACTGTTCAGTTGCCTCTCCTGCACAAGGATCTGTTTTCATCTGGATTACGTAAGCGGTCTGGTGTTCTTTTGTATGGTCCTCCAGGAACTGGCAAAACATTATTGGCCAAAGCTGTTGCCACCGAATGTTCCTTAAATTTTCTTAGTGTAAAAGGGCCGGAACTGATCAACATGTACATTGGAGAGTCTGAGAAGAATGTGCGAGACATTTTCCAGAAGGCTAGATCATCACGACCATGTGTTATCTTCTTCGATGAGCTTGATTCTCTTGCTCCAGCTCGGGGTGCTTCTGGGGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTGGCGGAGATTGATGGCCTGAATGATTCTGCACAGGATCTCTTTATCATAGGCGCAAGTAACAGGCCCGACTTGATAGACCCTGCACTTCTACGCCCAGGCAGATTTGATAAACTGCTGTATGTTGGAGTTAACTCTGATGCATCTTACAGAGAGAGGGTCCTTAAAGCACTTACCAGAAAGTTTAAATTGTCTGAAGACGTGTCACTTTACTCAATAGCTAAAATGTGTCCACCAAACTTTACTGGTGCAGACATGTATGCCCTGTGTGCAGATGCATGGTTTCAGGCTGCAAAACGCAAGGTTTCAAGTGCAGATCCAGAGTCTTCCTGTAAAGATGATGAAGCAGACTCTGTTGTTGTTGAATTCAGTGATTTTGTCCAGGTATTGGTGGAGCTGACGCCTTCTCTATCCATGGCTGAGCTTAAAAAGTACGAGCAACTGAGAGATCAGTTTGAAGGCACATCAAAATAA 2805 0.4357 MAGRRKPLVLDSTKLLINSVLSSSQGWEASPGARDKLFDGGSPRNLQLPVGILRLSEDGNERTEPQSATLDDSALVGLSTSLLRRLSITSGSLVLVKNVEMNIQRIAQAVALDPPGSHECTSDVKLPSPRMMLVFPSCAFPHGDMLVHEVAYVSPLLAFNLNLHITCLESILHQGEEVLASYFNPKVDEEVIAKSTETSSIDIELVPLVQAPRCASHLRVSFVKIPECGTLETLRGGSPSESEDRQNMIDLALQKHFQVDRYLAKGDIFGVSINWNCNSIACIPCNRKSQKKNGNLIYFKVIAMEPSDEPILRVNRASTALVLGGSFSSALPPDLLIAGPEEPVPLQGDTVKILASVLTPAFCPSALSLKFRVSVLLYGLAGCGKRTVVRYVARRLGLHVVEYNCHDITLSERNTSVALVQAFKTAQRYSPTILLLRHFEVFRDMQALEGQVNDQRGNTYEIASIIRKFTESTRKDSGIYSHEKPNGEFVEKSAENTSGHQILLIAAAVSSEGLPPSIRRCFSHEIKMGPLTEEQRAEMLSQSLRSVLSNTDGESFVKEIVGQTSGFMPRDMCALIADVGANIFPRSFDAVDKARPKDIDGSSSSEVMQESNRWKISPEVQGKEHLAKALERSKKRNAAALGAPKVPDVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSSRPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSAQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLSEDVSLYSIAKMCPPNFTGADMYALCADAWFQAAKRKVSSADPESSCKDDEADSVVVEFSDFVQVLVELTPSLSMAELKKYEQLRDQFEGTSK 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1439 934 Pfam ATPase family associated with various cellular activities (AAA) 375 528 IPR003959 GO:0005524|GO:0016887
Lele06g1439 934 Pfam ATPase family associated with various cellular activities (AAA) 688 820 IPR003959 GO:0005524|GO:0016887
Lele06g1439 934 CDD AAA 365 436 - -
Lele06g1439 934 Gene3D - 822 908 - -
Lele06g1439 934 PANTHER AAA-FAMILY ATPASE 71 931 - -
Lele06g1439 934 FunFam Peroxisome biogenesis protein 6 822 908 - -
Lele06g1439 934 Gene3D - 646 923 IPR027417 -
Lele06g1439 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 591 IPR027417 -
Lele06g1439 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 647 928 IPR027417 -
Lele06g1439 934 CDD AAA 682 820 - -
Lele06g1439 934 ProSitePatterns AAA-protein family signature. 791 809 IPR003960 GO:0005524|GO:0016887
Lele06g1439 934 Gene3D - 349 550 IPR027417 -
Lele06g1439 934 SMART AAA_5 371 532 IPR003593 -
Lele06g1439 934 SMART AAA_5 684 824 IPR003593 -
Lele06g1439 934 FunFam Peroxisomal biogenesis factor 6 646 835 - -
Lele06g1439 934 FunFam Peroxisome biogenesis protein 6 344 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1439 Lele-ChrLele06 9378613 9385512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1439 654 893 Calmodulin-binding Proteins AT3G56690 38.174 1.13e-40 160