Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1431 ATGCCTAGCATTATCGCTCCCGCTATTCCGATTGCGTCGTTCGAAGGATCTTCCTCTGCTAGCCTCTTGATCCATTCTTTGTTGGATATGTCTTCATCTGTTCCTCAAGAATCTGATTCCAGCCCACAGATCTACTCCCGGAAAGACAAGTCACTTGGACTACTTAGCTCCAACTTCTTCAAGTTATATAACCGCGAAGGTAGTGGGACGATTGGACTTGACGATGCTGCCTACCGATTAGGAGTTCAGCGTCGCCGCATGTATGATGTCGTCAACATATTGGAGACTGTTGGAGGGAAAAATCTATACCTATGGAAAGGTTTCAGAGAAATTCCTCGAGCTTTGAACGAGCTTAAGGAAGAGGGTATGAGAGAAAAATTTGATGCAGCCTACTGCAGGTCAGCTGAAGCATCAAAGAACAAAGAAACCGGTGGTTCTGGAACTAAAACTGATCCTTTGGCAATGGCATTGCCCAAAACTGAAAGCTGCAGAAGAGACAAATCTCTAGCACTTTTGACGGAGAATTTCATAAAACTCTTCCTCTGTTCAAATGCTGAAAATATCTTGCTTGAAGATGCTGCAAAGATAATGCCGGGTGATGCCCAGAATTCCACTGCCTTGAGAACAAAAGTCAGACGTTTATATGACATAGCAAATGTCCTTTCATCTGTCAATCTGATCGAGAAGACAAATCATCCCGAGCATAGGAAAACAGCATATAGGTGGTTGGGAGGGAAATCCAGTACAGAATCTGATGGCATCTTGGGCCAAAGTGCATCCAGGAAGAGAGTGTTTGGAGCGGAAATTACAAATTACAGCTTAAAGAGAAATAAAACAGATTCTTCAATGGATTCGCAGTCCCATGAAAAGATTATGCAAGTGTGTAAAAAACACGATGATTTGGAAAATGAATACATATGTAAAACTTTGGAGCACCAGCCTAAATGCAGTTCAAAGGCCATAGACTTTGGCCCTTTTGCTCCTGTCAAGTTTAGAAGAGGAGATCCAGCGCAGACATATGAGAAAGGAAGTGGTGAAAGTGCCCTTGACCCAATTGTAAAGGATAAGTTTGTTGATGGTGTGACTGCTCTGAAAGTGAGCGACCTCGTTGCTCATTACAGGGATGCGTGGAAGTCGTGGCTTGTTGAAGCTTCAGCGCGGCCACAGATTTTCTGA 1176 0.4362 MPSIIAPAIPIASFEGSSSASLLIHSLLDMSSSVPQESDSSPQIYSRKDKSLGLLSSNFFKLYNREGSGTIGLDDAAYRLGVQRRRMYDVVNILETVGGKNLYLWKGFREIPRALNELKEEGMREKFDAAYCRSAEASKNKETGGSGTKTDPLAMALPKTESCRRDKSLALLTENFIKLFLCSNAENILLEDAAKIMPGDAQNSTALRTKVRRLYDIANVLSSVNLIEKTNHPEHRKTAYRWLGGKSSTESDGILGQSASRKRVFGAEITNYSLKRNKTDSSMDSQSHEKIMQVCKKHDDLENEYICKTLEHQPKCSSKAIDFGPFAPVKFRRGDPAQTYEKGSGESALDPIVKDKFVDGVTALKVSDLVAHYRDAWKSWLVEASARPQIF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1431 391 Pfam E2F/DP family winged-helix DNA-binding domain 166 244 IPR003316 GO:0005667|GO:0006355
Lele06g1431 391 Pfam E2F/DP family winged-helix DNA-binding domain 48 98 IPR003316 GO:0005667|GO:0006355
Lele06g1431 391 PANTHER TRANSCRIPTION FACTOR E2F 33 328 IPR015633 GO:0000978|GO:0006357
Lele06g1431 391 SUPERFAMILY "Winged helix" DNA-binding domain 46 105 IPR036390 -
Lele06g1431 391 FunFam E2F transcription factor-like E2FE 159 246 - -
Lele06g1431 391 Gene3D - 41 109 IPR036388 -
Lele06g1431 391 Gene3D - 158 246 IPR036388 -
Lele06g1431 391 SMART E2F_TDP_2 164 244 IPR003316 GO:0005667|GO:0006355
Lele06g1431 391 SMART E2F_TDP_2 47 107 IPR003316 GO:0005667|GO:0006355
Lele06g1431 391 SUPERFAMILY "Winged helix" DNA-binding domain 166 244 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1431 Lele-ChrLele06 9318577 9322534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1431 30 384 E2F-DP Transcription Factor Family AT3G01330 42.932 6.79e-87 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Lele06g1431 E2F_TDP 7e-18 CL0123