Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1424 ATGATGGGCCAAGCTTCACTGGATCTCAGGAATTGCCTTCTGCTGCTATTGTGCAGCTCCATGTGCTTATGGGGTTTTGCTGCATCGGAGGTTGAAGATGACGTGAAATGCCTCAAGGGCATCCAAGATTCGTTCGGTGGTCCTGATGGGAAGCTTTCAACGTGGCAATTCAACAACAACACACCCGGCTTCATTTGCCGATTCAACGGCGTTACGTGCTGGAATGATCAGCAGAATCGCATCATCAACCTGGTTCTCAATAGTATGGAGCTCTCCGGTCGCCTGCCAGAGTCCTTGAAGTACTGTGTTAGTCTGCAGCGATTGGATCTGGGGTCCAACGACCTATATGGTGAGATCCCCAATGAGCTTTGTGTTTGGATGAAGTATTTAGTGAACCTTGACTTGTTGGCAAATCGTCTTTCTGGACCTATTCCCCCTTCTCTCGGGAATTGCTCGTATTTGAATGAGTTAAGCCTTTCCGGTAATCAGCTTTCAGGTGTTATCCCTGTCGAAATTGGGAGCTTGACTAGGCTTACAAAGTTTTCTGTTGCTAATAATCATCTTGAGGGTGCGATTCCTTCGTCTTTAAGTCGGTTTGATAAGGAGAACTTTGAGGGGAACAGTGGGCTTTGCGGGGTTCCTCTTGGATCTAAGTGTGGAGGGCTGACTAAGAAGAATCTTGCCATTATCATAGCTGCTGGGGTGTTTGGTGCAGCTGCTTCTTTATTACTGGCTTTTGGGCTTTGGTGGTGGTACCATTTGAGATTGAGTAAGAAGGGGTTTGGAGACGGAGCAAGTGATAATTGGGCTGTGAGATTGAGGGGTTACAAGCTTGTGCAAGTCACTCTGTTCCAAAAACCACTTGTGAAGGTTAAACTAGGCGATTTGATGGCGGCTACCAATAATTTCAGTGCAGAAAACATTCTTGTCTCAACAAGAACAGGAACTACTTACAAAGCAGATCTTCCTGATGGGTCAACCCTTGCAGTCAAACGGCTCAACACGTGTAAAATCTTGGCGAAGCTCTTTCGCGTTGAGATGAATAGGCTAGGCCTACTCAGGCACCCGAATTTGGCACCGCTTTTGGGATTCTGTGTAGTGGAAGAGGAAAAGTTTCTGGTTTACAAATACATGTCAAATGGAACTCTCTTCTCCTTGTTGCACAAAAACGGCGATGCATTGGACTGGCCCACGAGATTCGGAATAGGCTTGGGGGCAGCTAGGGGTCTTGCTTGGCTGCATCATGGGTGCCATCCTCCTATTATACACCAGAATATCTGTTCCAATGTGATTCTTGTTGATGAAGATTTTGATGCTCGTTTGATGGACTCTGGACTTGCCCGACTTATAACATCTGACTCTGAAGGGACTAGTTTTGTGAATGGAGACTTGGGGGAACTTGGCTATATGGCTCCAGAATATTCTAGCACTCTGGTTCCTTCCCTAAAAGGAGATGTTTATGGATTTGGGGTTGTGCTTTTGGAGTTGGTCACCGGGCAGAAACCTCTAGAAGTCAGCATCGGAGAGGAAGAAGTTAAGGGTAATTTAGTGAATTGGGTGAATACGCTTTCTAATTCTGGTCGCATCAAGGATTGCATTGACAGGGCCATAAGAGGAAAGGGACACGATGAGGGAATTTTGCAGTTTCTGAGAATTGCATGTAACTGTGTGGTTTCTCATACTAAGGATAGGTTGTCTATGTACCAGGTTTATCATTCGTTGAAGAGTCTGTCTAAGGACCAAAGTTTTTCGGAGCATGATGATGAATTTCCACTGATCTTCGGGAAGCCTAATGATGAATCAGCTTAG 1809 0.4577 MMGQASLDLRNCLLLLLCSSMCLWGFAASEVEDDVKCLKGIQDSFGGPDGKLSTWQFNNNTPGFICRFNGVTCWNDQQNRIINLVLNSMELSGRLPESLKYCVSLQRLDLGSNDLYGEIPNELCVWMKYLVNLDLLANRLSGPIPPSLGNCSYLNELSLSGNQLSGVIPVEIGSLTRLTKFSVANNHLEGAIPSSLSRFDKENFEGNSGLCGVPLGSKCGGLTKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLSKKGFGDGASDNWAVRLRGYKLVQVTLFQKPLVKVKLGDLMAATNNFSAENILVSTRTGTTYKADLPDGSTLAVKRLNTCKILAKLFRVEMNRLGLLRHPNLAPLLGFCVVEEEKFLVYKYMSNGTLFSLLHKNGDALDWPTRFGIGLGAARGLAWLHHGCHPPIIHQNICSNVILVDEDFDARLMDSGLARLITSDSEGTSFVNGDLGELGYMAPEYSSTLVPSLKGDVYGFGVVLLELVTGQKPLEVSIGEEEVKGNLVNWVNTLSNSGRIKDCIDRAIRGKGHDEGILQFLRIACNCVVSHTKDRLSMYQVYHSLKSLSKDQSFSEHDDEFPLIFGKPNDESA 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1424 602 Pfam Protein tyrosine and serine/threonine kinase 324 570 IPR001245 GO:0004672|GO:0006468
Lele06g1424 602 SUPERFAMILY Protein kinase-like (PK-like) 280 574 IPR011009 -
Lele06g1424 602 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Lele06g1424 602 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 264 377 - -
Lele06g1424 602 SUPERFAMILY L domain-like 31 207 - -
Lele06g1424 602 Gene3D Ribonuclease Inhibitor 31 221 IPR032675 -
Lele06g1424 602 ProSiteProfiles Protein kinase domain profile. 303 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1424 602 Gene3D Phosphorylase Kinase; domain 1 264 377 - -
Lele06g1424 602 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 79 576 - -
Lele06g1424 602 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 378 596 - -
Lele06g1424 602 FunFam Nuclear pore complex protein NUP107 31 198 - -
Lele06g1424 602 Gene3D Transferase(Phosphotransferase) domain 1 378 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1424 Lele-ChrLele06 9252092 9253900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1424 12 600 Receptor kinase-like Gene Family AT3G28450 62.312 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele06g1424 PK_Tyr_Ser-Thr 8.7e-28 CL0016