Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1420 ATGGACAAGCCACCACCCGATAATGCTGACCACAATGATGCTGAATCTTCCAATGCTAATAGCCTCCCCGACCTCAATGTTAGTGGCAGTGCTAGTATTAGTATGTGTAGTAGTAGTAGCAACGTTGAGACTAAGAGGAGCACTGGATCTATGACGGACTGTGAAGTCAGTGAGGGAAGTTTTAGGAGTTTTAGCCCTTCGAAGCCTCATAAGGGGAACGATATTAGGTGGGATGCGATACAATGTGTGAAGGGGAAAGATGGGGAATTGGGGTTGGGGCATTTCAGGCTGTTGAAGAAGCTCGGTTTTGGGGATATTGGGAGTGTGTATTTGGCTGAGCTCAGAGGAATGGGTTGTTTGTTCGCGATGAAGGTTATGGATAAGAACATGTTGGCTGGTAGGAAGAAATTGGCGAGAGCTCAGACTGAGAGAGACATTTTGGGTTTATTGGACCATCCTTTTCTTCCTTCCCTTTATTCACATTTTGAGACGGAGAAGTTCTCTTGCTTGCTCATGGAGTTTTGCAGTGGTGGGGATCTTCATACCCTCCGCCAGCGCCAGCAGGGCAAGTATTTCTCAGAGCAAGCTGCCAGGTTTTACGCTTCTGAAGTGCTTCTTGCGCTGGAGTATCTACACCTGATGGGAGTGGTGTACAGAGACTTGAAGCCAGAAAATGTACTTGTAAGAGAAGATGGGCATATCATGCTCTCTGATTTTGACTTATCACTAAGATGCTGTGTAAGTCCCACCCTTGTGCAGTCAAGTAGAGAACCATCTTGTCAGATATCTTCCTATTGCATTCAGCCATCTTCATGCATCGATCCACCCTGCAAATTATCCGCTTGCGTGGAGCCTTCATGCCTGCAACCATCTTGCTTCAAGCCCCATTTCTTCAGATCAATAAAGACCAACAAACCAAAGAGTGAAAAACACAGTTCCGCGAATTCAGACTCATTCCCAGTACTAATTGCTGAGCCAACTAATGCTCGCTCTATGTCATTTGTTGGGACTCATGAATATCTAGCTCCTGAAATTATAAGAGGTGATGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTGTTTTCCTGTATGAATTGTTGTTTGGGAAGACCCCATTTAAAGGCAATGGGAATCGAGAAACGTTGTTCAATGTTGTTGGTCAGAATCTAAAGTTTCCTGAGGGATCAAGCATCAGTTTTGCAGCGAAGGATTTGATAAGAGGATTGCTTGTGAAAGATCCACAGAAGAGACTTGGATTCAAAAGAGGAGCCACAGAGATCAAACAACATCATTTCTTTGAAGGTATTAATTGGGCTCTCATTCGCAGCATTCATCCGCCTGAGATCCCAAAACCGCTAGTCCTTTCATTTATGAATCAGACATCCAAGTCACCTTCAGTGCCTCCTAGTGAAAAAGGGGCTGCTACAACTGATTCAGACAGGTCCTCTTCGGGTCCATACTTGGATTTTGAATTCTTTTAG 1485 0.4478 MDKPPPDNADHNDAESSNANSLPDLNVSGSASISMCSSSSNVETKRSTGSMTDCEVSEGSFRSFSPSKPHKGNDIRWDAIQCVKGKDGELGLGHFRLLKKLGFGDIGSVYLAELRGMGCLFAMKVMDKNMLAGRKKLARAQTERDILGLLDHPFLPSLYSHFETEKFSCLLMEFCSGGDLHTLRQRQQGKYFSEQAARFYASEVLLALEYLHLMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCCVSPTLVQSSREPSCQISSYCIQPSSCIDPPCKLSACVEPSCLQPSCFKPHFFRSIKTNKPKSEKHSSANSDSFPVLIAEPTNARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGVFLYELLFGKTPFKGNGNRETLFNVVGQNLKFPEGSSISFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHHFFEGINWALIRSIHPPEIPKPLVLSFMNQTSKSPSVPPSEKGAATTDSDRSSSGPYLDFEFF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1420 494 FunFam serine/threonine-protein kinase D6PK-like 329 452 - -
Lele06g1420 494 SUPERFAMILY Protein kinase-like (PK-like) 70 469 IPR011009 -
Lele06g1420 494 Gene3D Transferase(Phosphotransferase) domain 1 175 244 - -
Lele06g1420 494 Gene3D Phosphorylase Kinase; domain 1 94 174 - -
Lele06g1420 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Lele06g1420 494 FunFam Serine/threonine-protein kinase D6PK-like 93 178 - -
Lele06g1420 494 FunFam serine/threonine-protein kinase D6PK-like 179 246 - -
Lele06g1420 494 Gene3D Transferase(Phosphotransferase) domain 1 328 452 - -
Lele06g1420 494 MobiDBLite consensus disorder prediction 461 489 - -
Lele06g1420 494 PANTHER FLIPPASE KINASE 1-RELATED 34 456 - -
Lele06g1420 494 CDD STKc_phototropin_like 94 455 - -
Lele06g1420 494 Pfam Protein kinase domain 96 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1420 494 Pfam Protein kinase domain 331 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1420 494 ProSiteProfiles Protein kinase domain profile. 95 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1420 494 SMART serkin_6 95 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1420 494 MobiDBLite consensus disorder prediction 461 485 - -
Lele06g1420 494 MobiDBLite consensus disorder prediction 1 70 - -
Lele06g1420 494 MobiDBLite consensus disorder prediction 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1420 Lele-ChrLele06 9224220 9226222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1420 1 494 AGC Kinase Gene Family AT5G40030 70.291 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele06g1420 Pkinase 6.7e-37 CL0016