Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1417 ATGTCTCACACTGGATGTGCTGCGTGCAAACGCCGAAGAACAAGATGCTCAGAATACTGCATTTTCGCTCCATATTTTCCGGCAAATCAACCCCAAAGATTTGACATGGTTCACCGTAAGTTTTGCTACGCAGGCATCAAACGTATAATGAGGCAGGTTTCTCTAGAACAAAGAGAAGATGCCATGCAAAGCATTATATACGAATCCCTATGGAGAGTGCAACGCCCCGTTCATGGATGTGTTGTCTTGAGAGAGTATTTCGCATCTCACCTTGCAAAAGCATACGCTGAATTAAAACATCTGAAAGCGATTCTTTCCTTCTTGCGAACACAACAATTACAACCCCAAGATCTTGCAGACCCTGAAGAAATAGATGCCCAGAAGACTGCATTCATCCAGAACAAAGATTCGATGCCATGA 420 0.4357 MSHTGCAACKRRRTRCSEYCIFAPYFPANQPQRFDMVHRKFCYAGIKRIMRQVSLEQREDAMQSIIYESLWRVQRPVHGCVVLREYFASHLAKAYAELKHLKAILSFLRTQQLQPQDLADPEEIDAQKTAFIQNKDSMP 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1417 139 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Lele06g1417 139 Pfam Lateral organ boundaries (LOB) domain 6 102 IPR004883 -
Lele06g1417 139 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1417 Lele-ChrLele06 9167594 9170021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1417 1 98 AS2 family AT2G23660 40.816 2.17e-25 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele06g1417 LOB 2.7e-27 No_clan