Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1404 ATGTTCTTGTCCGTGTCTAGATGCGAGCACTACAAGAGAAGGTGCAAAATTCGAGCTCCGTGCTGTGACCAGATCTTCCCATGTCGCCACTGCCACAACGAGGCTATGAGCTCGCTGGACAACCCCAAAGAGCGCCATGAACTGGTCAGGCGTGATGTTAAGCAGGTTATATGTTCAGTCTGTGATGTTGAGCAGGAGGTTGCCAAAGTGTGTTCTAACTGCGGTGTCAACATGGGAGAATATTATTGTGAGATTTGCAAATTCTATGACGATGATACAGATAAAGGGCAATTCCATTGCGAGGAATGTGGTATTTGCAGGGTTGGTGGTCGTGATAACTTCTTTCATTGTCAGAAATGCGGATCATGCTATGCAGTCGACCTGAGAAACAATCACTCCTGTGTAGAGAACTCAATGAAGAGCCACTGCCCTGTCTGCTATGAGTATCTATTTGATTCGATTAAAGGCACCACAATTATGAAGTGTGGACATACAATGCATATGGAATGCTTTCGAGAGATGGCAGCCCATCAGTACCGTTGTCCTGTTTGCTTGAAGTCCATATTCAATATGTCCGAGGATTGGAGAAATCTAGATCTTGAGATTGAAGCTGTTCCGATGCCTCAGGAGTACAAGACTGAGGTCTCAATTCTGTGCAATGATTGCAATACCACCAGCGAGGTGTCGTTTCACGTTTTAGGTCACAAGTGCAGACAGTGCGGTTCCTACAACACCCGTAGGATTTCAACACCTGAACATAAATGA 765 0.4549 MFLSVSRCEHYKRRCKIRAPCCDQIFPCRHCHNEAMSSLDNPKERHELVRRDVKQVICSVCDVEQEVAKVCSNCGVNMGEYYCEICKFYDDDTDKGQFHCEECGICRVGGRDNFFHCQKCGSCYAVDLRNNHSCVENSMKSHCPVCYEYLFDSIKGTTIMKCGHTMHMECFREMAAHQYRCPVCLKSIFNMSEDWRNLDLEIEAVPMPQEYKTEVSILCNDCNTTSEVSFHVLGHKCRQCGSYNTRRISTPEHK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1404 254 Pfam Ring finger domain 142 184 IPR001841 -
Lele06g1404 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 186 IPR013083 -
Lele06g1404 254 Gene3D - 212 252 - -
Lele06g1404 254 ProSiteProfiles Zinc finger CTCHY-type profile. 78 142 IPR017921 -
Lele06g1404 254 Pfam CHY zinc finger 8 88 IPR008913 GO:0008270
Lele06g1404 254 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 7 252 - -
Lele06g1404 254 SMART ring_2 143 184 IPR001841 -
Lele06g1404 254 Pfam Zinc-ribbon 189 246 IPR039512 -
Lele06g1404 254 ProSiteProfiles Zinc finger CHY-type profile. 1 76 IPR008913 GO:0008270
Lele06g1404 254 SUPERFAMILY RING/U-box 140 191 - -
Lele06g1404 254 SUPERFAMILY Zinc hairpin stack 79 136 IPR037275 -
Lele06g1404 254 SUPERFAMILY CHY zinc finger-like 5 77 IPR037274 GO:0008270
Lele06g1404 254 ProSiteProfiles Zinc finger RING-type profile. 143 184 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1404 Lele-ChrLele06 9035881 9038801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1404 8 250 C2H2 Transcription Factor Family AT3G18290 42.000 4.69e-56 191